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318 update for tes compliance #1221

318 update for tes compliance

318 update for tes compliance #1221

GitHub Actions / JUnit Test Report failed Sep 16, 2024 in 0s

1 tests run, 0 passed, 0 skipped, 1 failed.

Annotations

Check failure on line 1 in nf

See this annotation in the file changed.

@github-actions github-actions / JUnit Test Report

nf.Parameters: --skip_fastq_download

Assertion failed: 

1 of 3 assertions failed
Raw output
Nextflow stdout:

N E X T F L O W  ~  version 23.04.5
Launching `/home/runner/work/fetchngs/fetchngs/.nf-test-8438f5d91bc08a5f29f200962ac061dc.nf` [sick_sammet] DSL2 - revision: 68dcf2aadf
Downloading plugin nf-validation@1.1.3
[b0/f2f8ca] Submitted process > SRA:SRA_IDS_TO_RUNINFO (SRX6725035)
[bb/aaa060] Submitted process > SRA:SRA_IDS_TO_RUNINFO (ERX1234253)
[6d/e23ee6] Submitted process > SRA:SRA_IDS_TO_RUNINFO (DRX026011)
[df/d66322] Submitted process > SRA:SRA_RUNINFO_TO_FTP (1)
[b5/bbf9c3] Submitted process > SRA:SRA_RUNINFO_TO_FTP (2)
[12/8aedfb] Submitted process > SRA:SRA_TO_SAMPLESHEET (SRX6725035_SRR9984183)
[7a/d398af] Submitted process > SRA:SRA_TO_SAMPLESHEET (ERX1234253_ERR1160846)
[48/8fc7ff] Submitted process > SRA:SRA_RUNINFO_TO_FTP (3)
[96/1b7f8a] Submitted process > SRA:SRA_TO_SAMPLESHEET (DRX026011_DRR028935)
[8e/deaa5c] Submitted process > SRA:MULTIQC_MAPPINGS_CONFIG (1)
Nextflow stderr: