v1.2.2

What's Changed (thanks to JOSS Review: openjournals/joss-reviews#5057)

• Fix advanced examples notebook by @ayush9pandey in #154
• Add contributing.md by @ayush9pandey in #158
• Benchmarking bioscrape performance by @ayush9pandey in #159
• Changes to package after JOSS review 1 by @ayush9pandey in #160
• Enhanced documentation (JOSS review 2) by @ayush9pandey in #165
• Enhanced documentation with Bioscrape v1.2.2 by @ayush9pandey in #166

v1.2.0

Bioscrape v1.2 with:

1. Inference bug fixes, parallelization, and new features (check out the Wiki)
2. Sensitivity analysis
3. New readme, updated documentation, and testing.

Detailed release notes:

What's Changed

• Anandh's latest updates by @murrayrm in #1
• Merge changes from Anandh's fork by @murrayrm in #2
• Working version of bioscrape for BE 240 by @murrayrm in #3
• Merge changes from main repository. by @murrayrm in #4
• Fixing saving and loading SBML by @ayush9pandey in #24
• Saving and loading sbml (finally) fixed by @ayush9pandey in #29
• Bioscrape Inference working version by @ayush9pandey in #33
• Inference bug fixes by @ayush9pandey in #50
• Fixed Saved Result Randomized Unit Testing by @WilliamIX in #66
• Ode safe mode by @WilliamIX in #67
• Bioscrape annotations fix by @WilliamIX in #65
• Remove underscore from parameter definition by @WilliamIX in #68
• C vector bug fix by @WilliamIX in #69
• Dev by @WilliamIX in #70
• Lineage beta by @WilliamIX in #71
• Dev to master by @WilliamIX in #74
• Inference speed ups by @WilliamIX in #73
• Update README to fix "build:passing" tag on main page by @ayush9pandey in #75
• Update current dev from master by @ayush9pandey in #77
• Add 6 new priors by @ayush9pandey in #76
• warnings.warn removed by @WilliamIX in #80
• Inference bug fixes by @ayush9pandey in #82
• Pip install 2 by @WilliamIX in #87
• Bioscrape release v1.0.3 by @ayush9pandey in #112
• Dev to Master Inference Upgrades by @WilliamIX in #120
• update to version 1.0.4 by @WilliamIX in #121
• Merging changes from dev to master by @ayush9pandey in #131
• Bioscrape v1.1.0 by @ayush9pandey in #141
• Rename workflow to bioscrape.yml by @ayush9pandey in #142
• Add colab links + add more information to README by @ayush9pandey in #144
• Dev to Master for v1.2 by @ayush9pandey in #148
• update readme by @ayush9pandey in #149
• Add setup.cfg for pypi by @ayush9pandey in #150

New Contributors

• @murrayrm made their first contribution in #1

Full Changelog: v0.0.1...v1.2.0