Add pip audit #920
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Add pip audit #920
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Codecov ReportAll modified and coverable lines are covered by tests ✅
Additional details and impacted files@@ Coverage Diff @@
## dev #920 +/- ##
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Coverage 80.12% 80.12%
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Files 172 172
Lines 15026 15026
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Hits 12039 12039
Misses 2987 2987 ☔ View full report in Codecov by Sentry. |
dancoates
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Sep 10, 2024
nevoodoo
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Sep 10, 2024
* Better ETL accessors (#897) * Better ETL accessors (soon to action, analysis group) * Apply pre-commit after rebase * Docstring * Add analysis group to etl accessors * No red lines usually means it's fine --------- Co-authored-by: Michael Franklin <illusional@users.noreply.github.com> * Updated etl fixes from deployment (#910) * Deploy fixes * Bump version * PR clean-up * Let the load method handle both dict / list requests --------- Co-authored-by: Michael Franklin <illusional@users.noreply.github.com> * Fixing etl-load function, removing wrong check. (#911) * Fixing etl load (#912) * Fixing etl-load function, removing wrong check. * Fixing by-type key of etl-load. * Sonaqube scanner (#915) * OurDNA Dashboard Enhancements (#863) * SET-68 Added initial 1-3 day buckets by processing times * SET-74 SET-68 fixed queries and added collection site/processing chart * minor null fix on ODD * OurDNA Dashboard UI Enhancements (#908) * SET-75 Fixed y-axis bug * SET-73 added base for chart * working cleanup * SET-72 Added 24hr collection to process end time buckets tile * Updated field for collection-lab * Testing WF identity for Sonar (#917) * testing WF identity * testing WF identity * Renamed workflow * Remove Google Auth from Sonarqube Workflow (#918) * testing WF identity * testing WF identity * Renamed workflow * final workflow * Fix frontend linting and formatting (#916) * organize imports * add prettier check to linting workflow * fix linting errors * add working dir to frontend commands * fix borked import organization in some files * fix formatting commands so they get all files they weren't working cos the glob was being processed by zsh rather than prettier. * fix ourdna dashboard linting error * fix precommit problems * fix some type errors * Bump Packages (#919) * bumping packages to patch vulns * placing pin on dev only * more upgrades * fixed stale requirements-dev.txt * final upgrades * fixed pip-compile command * Update sonarqube project id (#923) * Save test coverage and upload to sonarqube (#924) * Save test coverage and upload to sonarqube * Pass linting * Add pip audit (#920) * Added pip-audit workflow * added runs-on * running only on dev reqs file * added checkout repo action * added requirements.txt back * Sonarqube show coverage (#925) * Save test coverage and upload to sonarqube * Pass linting * Refactor to have sonarqube be in the test.yaml file * Test * Rename * More renaming * Fix needs keyword * Add Sonarqube condition --------- Co-authored-by: Michael Franklin <22381693+illusional@users.noreply.github.com> Co-authored-by: Michael Franklin <illusional@users.noreply.github.com> Co-authored-by: Milo Hyben <milo-hyben@users.noreply.github.com> Co-authored-by: Sabrina Yan <9669990+violetbrina@users.noreply.github.com> Co-authored-by: Dan Coates <dan.coates@populationgenomics.org.au>
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This adds
pip-auditas a workflow to our CI/CD