Skip to content

Issues: xiaochuanle/NECAT

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

44 Open 11 Closed
44 Open 11 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Polishing step is not working
#58 opened Sep 11, 2023 by ilenia6
cns_1_al_vol_0.sh: line 16: 35702 Bus error
#57 opened Aug 3, 2023 by QichengMa
6
NECAT with new nanopore R10 Q20+
#56 opened Jul 28, 2023 by joscarhuguet
NUM_ITER
#55 opened Jul 18, 2023 by theo-allnutt-bioinformatics
1
Very large temporary files
#54 opened Jul 18, 2023 by theo-allnutt-bioinformatics
Issue about the assembled genome size about bridged and polished step
#53 opened Jul 1, 2023 by linshengnan09
1
fsa_rd_tools: fsa/utility.cpp:47: size_t fsa::FindLongestXHeap(std::vector<int>&, long long int): Assertion `index > 0' failed.
#52 opened Jun 27, 2023 by xylapple2013
Detailed Documentation and Explanation of Output
#51 opened Jun 23, 2023 by ndeimler99
I am not able to use necat
#50 opened Jun 21, 2023 by Suelina
NECAT running error
#48 opened Apr 21, 2023 by uqunakan
Issue assembling plant genome with NECAT
#47 opened Jan 11, 2023 by LeoVincenzi
4
Died at /home/NECAT/Linux-amd64/bin/Plgd/Script.pm line 25.
#46 opened Oct 31, 2022 by jasonshiller
Question
#45 opened Aug 19, 2022 by yzhang-github-pub
Quiet mode / verbosity levels
#44 opened May 3, 2022 by KasperThystrup
Failed to run script, 137 in the assembly step
#43 opened Apr 22, 2022 by anacatalan
1
[Warning] Failed to run script, 139
#42 opened Apr 20, 2022 by ChooseelBunsuwansakul
1
File not exist error.
#40 opened Mar 2, 2022 by gyudae
1
assembly error
#39 opened Dec 8, 2021 by AstrMary
1
Correction failed for one partition
#38 opened Nov 26, 2021 by j-bartos
DATA squeezed alot
#37 opened Jun 23, 2021 by khush876
Bridged and polished reads difference
#36 opened Jun 2, 2021 by sellers0
1
[FATAL] No overlaps were loaded
#33 opened May 7, 2021 by 544728460
1
where is necatsv?
#32 opened Feb 18, 2021 by christinawu2008
Mapping corrected reads to raw reads
#31 opened Jan 20, 2021 by jwcodee
Plasmid loss
#28 opened Dec 9, 2020 by liweicheng0011
ProTip! Mix and match filters to narrow down what you’re looking for.