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Update base modification test files to use the final MM/ML tags #776

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merged 1 commit into from
Jul 17, 2024

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jmarshall
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Change the test files so they use MM:Z and ML:B:C in their final capitalised forms.

Also add HTSlib's MM-explicit.sam, which exercises the skipped bases modification state indicator character, and add an example MN:i field to MM-multi.sam, to keep it in sync with HTSlib's copy.

This is fairly trivial so should be able to be merged quickly.

@jkbonfield
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Looks good to me. Thanks John

…amtools#776)

Also add HTSlib's MM-explicit.sam, which exercises the skipped bases
modification state indicator character, and add an example MN:i field
to MM-multi.sam, to keep it in sync with HTSlib's copy.
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