[patch] replace logger with snippets version

pyiron_base/__init__.py

@@ -44,10 +44,6 @@
 
 from pyiron_base.jobs.job.toolkit import Toolkit, BaseTools
 
-# Expose snippets references in base API for backwards compatibility
-from pyiron_snippets.import_alarm import ImportAlarm
-from pyiron_snippets.deprecate import Deprecator, deprecate, deprecate_soon
-
 # Internal init
 from ._version import get_versions
 from pyiron_base.utils.jedi import fix_ipython_autocomplete
@@ -76,10 +72,6 @@
     HasStoredTraits,
     InputList,
     GenericParameters,
-    Deprecator,
-    deprecate,
-    deprecate_soon,
-    ImportAlarm,
     Executable,
     Notebook,
     load,

pyiron_base/database/generic.py

@@ -5,13 +5,13 @@
 DatabaseAccess class deals with accessing the database
 """
 
-from pyiron_base.state.logger import logger
 import numpy as np
 import re
 import os
 from datetime import datetime
 import pandas
 from pyiron_snippets.deprecate import deprecate
+from pyiron_snippets.logger import logger
 from sqlalchemy import (
     create_engine,
     MetaData,

pyiron_base/database/interface.py

@@ -5,14 +5,14 @@
 DatabaseAccess class deals with accessing the database
 """
 
-from pyiron_base.state.logger import logger
 from abc import ABC, abstractmethod
 from collections.abc import Iterable
 import warnings
 import numpy as np
 import re
 import pandas
 from pyiron_snippets.deprecate import deprecate
+from pyiron_snippets.logger import logger
 import typing
 import fnmatch
 

pyiron_base/database/manager.py

@@ -6,7 +6,7 @@
 """
 
 from urllib.parse import quote_plus
-from pyiron_base.state.logger import logger
+from pyiron_snippets.logger import logger
 from pyiron_snippets.singleton import Singleton
 from pyiron_base.state.settings import settings as s
 import os

pyiron_base/state/__init__.py

@@ -14,11 +14,11 @@
 compatibility.
 """
 
-from pyiron_base.state.logger import logger as _logger
 from pyiron_base.database.manager import database as _database
 from pyiron_base.state.publications import publications as _publications
 from pyiron_base.state.queue_adapter import queue_adapters as _queue_adapters
 from pyiron_base.state.settings import settings as _settings
+from pyiron_snippets.logger import logger as _logger
 from pyiron_snippets.singleton import Singleton
 from typing import Dict, Union
 

pyiron_base/state/settings.py

@@ -36,10 +36,10 @@
 import os
 import warnings
 from configparser import ConfigParser
-from pyiron_base.state.logger import logger
 from pyiron_base.state.publications import publications
 from pyiron_base.utils.strtobool import strtobool
 from pathlib import Path
+from pyiron_snippets.logger import logger
 from pyiron_snippets.singleton import Singleton
 from typing import Union, Dict, List
 from copy import deepcopy

pyiron_base/utils/error.py

@@ -11,7 +11,7 @@
 import time
 from typing import Callable, TypeVar, Type, Tuple, Optional, Union
 
-from pyiron_base.state.logger import logger
+from pyiron_snippets.logger import logger
 
 __author__ = "Joerg Neugebauer, Jan Janssen"
 __copyright__ = (