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Release #639

Merged
merged 5 commits into from
Jan 3, 2024
Merged

Release #639

merged 5 commits into from
Jan 3, 2024

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illusional
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Schema has been released

michael-harper and others added 5 commits December 15, 2023 10:47
* tob assay metadata harmonisation. field_mapping is a draft mapping at this point (not yet agreed upon)

* fixed some linting issues

* refactored to make class-based

* Move tob_metadata_harmonisation.py to scripts directory

* fixed linting issues

* removed redundant queries and added query variables to separate inactive vs. active. Also added walrus to harmonisation logic
* Create md5 files script

* Use analysis-runner base image for jobs

* Pad extra space inside .md5 file

* Pad extra space inside .md5 file

* Pad extra space inside .md5 file

* Pad extra space inside .md5 file

* Pad extra space inside .md5 file

* Just keep the checksum in the md5 file

* Remove extra quote

* Add default file extensions to skip

* Add billing project option for working with requester pays buckets

* Fix options

* Fix args

* Linting

* Remove billing_project CLI option

* Add force_recreate option, get driver image from config
Co-authored-by: Michael Franklin <illusional@users.noreply.github.com>
Co-authored-by: Michael Franklin <illusional@users.noreply.github.com>
* Initial scrap implementation of a changelog

* Include ar-guid on changelog by default

* Use await for changelog_id

* More changelogs

* Rename changelog -> audit_log

* Fix tests

* Add participant audit log to graphql as a test

* Add a few more cases in

* Fix meta value passing

* Fix missing audit log

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Co-authored-by: Michael Franklin <illusional@users.noreply.github.com>
@illusional illusional merged commit 2a49cd9 into main Jan 3, 2024
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4 participants