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Add --fs-no-resume option to reuse existing freesurfer outputs without resuming (eg. longitudinal pipeline base) #393
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e3fd6f8
wip: add a flag to reuse freesurfer as is, for longitudinal base case
bpinsard ef288d8
first pass, fix errors
bpinsard 83c55e9
fix workflows connections
bpinsard 2502b25
flake8
bpinsard 6ba918c
fix doc building
bpinsard af86b3d
typo
bpinsard 92735a2
fix docs 2
bpinsard c16ea4d
Merge remote-tracking branch 'upstream/next' into enh/fs_long
bpinsard 6e4b1ae
fix merge errors
bpinsard 1d70209
fix docs
bpinsard ef41799
add circleci tests for --fs-reuse-base
bpinsard 8465bfe
Merge remote-tracking branch 'upstream/master' into enh/fs_long
bpinsard 0767f70
Merge remote-tracking branch 'upstream/master' into enh/fs_long
bpinsard 2320c2a
conform with new style rules
bpinsard c7d2e36
Update .circleci/config.yml
bpinsard be0cefc
change option name to --fs-no-resume
bpinsard 345f836
Merge remote-tracking branch 'upstream/master' into enh/fs_long
bpinsard 3c51c9a
adjust docstrings
bpinsard d6e5894
fix rebase/merge messups, docstrings
bpinsard f60c0f1
Merge branch 'master' into enh/fs_long
effigies ba4611b
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Probably needs different line break points, but here's some updated wording: