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Update for global HELICS_PORT #16

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merged 6 commits into from
Apr 26, 2023
Merged

Update for global HELICS_PORT #16

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ea4e3a5
Update bash_script.sh
dvaidhyn Apr 20, 2023
a236e86
Update amr_input.inp
dvaidhyn Apr 20, 2023
fa46edf
Update amr_input.inp
dvaidhyn Apr 20, 2023
95dcfb8
Update batch_script.sh
dvaidhyn Apr 20, 2023
9dbed3b
A couple of cleanups for consistency.
misi9170 Apr 26, 2023
f4748cf
example_04 largely redundant, but updated for completeness.
misi9170 Apr 26, 2023
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10 changes: 8 additions & 2 deletions example_case_folders/example_sim_04/batch_script.sh
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Expand Up @@ -25,13 +25,19 @@ module load netcdf-c/4.7.3/gcc-mpi
# module load mpt


# Set the helics port to use:
export HELICS_PORT=23405

#make sure you use the same port number in the amr_input.inp and emu_input_000.yaml files.

# Set up the helics broker
helics_broker -t zmq -f 2 --loglevel="debug" &
helics_broker -f 2 --consoleloglevel=trace --loglevel=debug --local_port=$HELICS_PORT &


# Need to set this to your emu_python folder
# cd /home/pfleming/emu_python/emu_python
python3 emu_runscript.py emu_input_000.yaml >> logemu 2>&1 & # Start the controller center and pass in input file

# Now go back to scratch folder and launch the job
# cd /scratch/pfleming/c2c/example_sim_02
mpirun -n 72 /home/pfleming/amr-wind/build/amr_wind amr_input.inp >> logamr 2>&1
mpirun -n 72 /home/pfleming/amr-wind/build/amr_wind amr_input.inp >> logamr 2>&1
1 change: 1 addition & 0 deletions example_case_folders/example_sim_05/amr_input.inp
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Expand Up @@ -76,6 +76,7 @@ ABL.stats_output_format = netcdf

# Whether to use helics
helics.activated = true
helics.broker_port =23405

#¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨#
# ADAPTIVE MESH REFINEMENT #
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9 changes: 7 additions & 2 deletions example_case_folders/example_sim_05/bash_script.sh
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Expand Up @@ -4,8 +4,13 @@
# A lot of modules and conda stuff
conda activate emupy

# Set the helics port to use:
export HELICS_PORT=23405

#make sure you use the same port number in the amr_input.inp and emu_input_000.yaml files.

# Set up the helics broker
helics_broker -t zmq -f 2 --loglevel="debug" &
helics_broker -f 2 --consoleloglevel=trace --loglevel=debug --local_port=$HELICS_PORT &

# Need to set this to your emu_python folder
# cd /home/pfleming/emu_python/emu_python
Expand All @@ -16,4 +21,4 @@ python3 emu_runscript_dummy_amr.py amr_input.inp >> logdummy 2>&1
# Now go back to scratch folder and launch the job

# cd /scratch/pfleming/c2c/example_sim_02
# mpirun -n 72 /home/pfleming/amr-wind/build/amr_wind amr_input.inp >> logamr
# mpirun -n 72 /home/pfleming/amr-wind/build/amr_wind amr_input.inp >> logamr
1 change: 1 addition & 0 deletions example_case_folders/example_sim_06/amr_input.inp
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Expand Up @@ -76,6 +76,7 @@ ABL.stats_output_format = netcdf

# Whether to use helics
helics.activated = true
helics.broker_port = 32000

#¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨#
# ADAPTIVE MESH REFINEMENT #
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5 changes: 3 additions & 2 deletions example_case_folders/example_sim_06/batch_script.sh
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Expand Up @@ -24,14 +24,15 @@ module load netcdf-c/4.7.3/gcc-mpi
# module load mkl
# module load mpt

export HELICS_PORT=32000

# Set up the helics broker
helics_broker -t zmq -f 2 --loglevel="debug" &
helics_broker -t zmq -f 2 --loglevel="debug" --local_port=$HELICS_PORT &

# Need to set this to your emu_python folder
# cd /home/pfleming/emu_python/emu_python
python3 emu_runscript.py emu_input_000.yaml >> logemu 2>&1 & # Start the controller center and pass in input file

# Now go back to scratch folder and launch the job
# cd /scratch/pfleming/c2c/example_sim_02
mpirun -n 72 /home/pfleming/amr-wind/build/amr_wind amr_input.inp >> logamr 2>&1
mpirun -n 72 /home/msinner/emu_moa_dev/amr-wind/build/amr_wind amr_input.inp >> logamr 2>&1