Upgrade sqlalchemy requirement to v2

* Wrap heterogeneity estimator in a separate class and add visualizations

* Bug fix for plotting heterogeneous background flow field

* Resolve pdf plotting functionality

* Simplify and clean up example case for heterogeneity map extraction

* Add output pdf to gitignore

* ruff formatting

* Delete commented legacy code snippets

* Remove plotting_dict: unused variable

* Remove bare except and force error instead

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Co-authored-by: Paul <paul.fleming@nrel.gov>

…accordingly (#158)

* Add simple function to identify turbines that do not affect turbines of interest, and add function to reduce floris accordingly

* Small bug fix and set wd_array as input

* Ruff formatting and remove unused variables

* Add example

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Co-authored-by: Paul <paul.fleming@nrel.gov>

* Apply pandas convention to sqldatabase

* Rename to analysis; will move other functionality here.

* Dissolve dataframe_operations and turbine_analysis folders

* Consolidate model fitting tools.

* Remove raw_data_handling in favor of moving into own repo.

* utilities subdir added, may be collapsed later.

* Imports working for tests.

* Update file paths for examples.

* Tests pass with v3 floris.

* Cleanup move.

* artificatiol examples 00 subdir updated imports.

* 01 subdir running.

* 02_wake_steering_design imports.

* Bugfix: wrong variable checked.

* 03_energy_ratio imports.

* 04_floris_tuning imports.

* Smarteole example imports updated.

* Ruff 1.

* File endings (Ruff 2)

* Remove unused large df reader/writer.

* And unused import.

* preprocessing -> data_processing.

* move bias estimation to data_processing for consistency.

* Move optimization to utilities.

* Ruff.

* Move utilities from specific modules to utilities module.

* turbulence_intensity -> turbuelence_intensities.

* Minor compatibility changes to calculate_florix_approx_table. Left TODOs for better integration with FLORIS v4.

* Avoid use of ParallelInterface as not yet updated. May revert; however, fast as it.

* Ruff

* ruff format

* Update "thrust" to "thrust_coefficient" per change in FLORIS

* Update visualize_cut_plane syntax

* ws_array and wd_array must be same length

* Correct to absolute power

* Update to v4

* Update to matplotlib 3.8 syntax

* bump up matplotlib requirement

* Update 06

* Update example 07

* Update tuning notebook

* Update FLORIS tuning

* Update tuner utilities

* Remove extra hyphen

* Update 06 example

* Update 07 example

* Update 01 notebook

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Co-authored-by: Paul <paul.fleming@nrel.gov>

* Add coveralls to ci

* Update coverage runs

* Append index faults by column to avoid only returning last columns faults

* Add test for find_sensor_stuck_faults

* Ruff format.

* Option for returning stuck sensors by column.

* Rerun smarteole examples in case.

* Rerun artificial data examples.

* Update to set()->run(); tests pass.

* WIP; workin g on examples.

* FlorisModel and related changes.

* fi -> fm, likely incomplete.

* .floris. -> .core.

* Updated floris_approx_table calculation.

* Tests passing.

* 00 examples.

* 01 artificial examples.

* 00, 01 from wake_steering_design.

* 02_wake_steering_design examples running.

* Notebooks updated.

* 03_energy_ratio scripts; 05 contains a bug still.

* 04 folder done, but not sure 00 notebook producing correct outputs.

* Smarteole examples running.

* Ruff and isort.

* Undoing updates on _legacy examples.

* ruff format.

…rs (#182)

* increase usage of wind_data objects

* Small cleanup

* Fix bad output

Merge v2 branch into develop

* More details on FLASC packages, point users to examples.

* Remove trailing whitespace.