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intron-annotation

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sanjanabhatnagar / Inferring-Exon-and-Intron-Metadata-from-.gff-file

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This pipeline infers exon functional annotations using coordinates from a .gff file and derives corresponding intron coordinates along with relevant annotations. Users can optionally specify the length of intronic fragments to extract. The pipeline is suited for splicing code analyses.

gff-toolkit gff splicing-analyses splicing introns intron-classification exon-annotation exon-intron-structure intron-annotation intron-coordinates
  • Updated Jun 27, 2025
  • Python

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