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Merge pull request #1006 from stan-dev/remove-old-vignette #1923

Merge pull request #1006 from stan-dev/remove-old-vignette

Merge pull request #1006 from stan-dev/remove-old-vignette #1923

---
# Github Actions workflow to analyze CmdStanR code, test coverage
# yamllint disable rule:line-length
name: Test coverage
'on':
push:
branches:
- master
pull_request:
branches:
- master
jobs:
test-coverage:
if: "! contains(github.event.head_commit.message, '[ci skip]')"
runs-on: ${{ matrix.config.os }}
name: ${{ matrix.config.os }}
strategy:
fail-fast: false
matrix:
config:
- { os: windows-latest }
- { os: ubuntu-latest }
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
NOT_CRAN: true
steps:
- name: cmdstan env vars
run: |
echo "CMDSTAN_PATH=${HOME}/.cmdstan" >> $GITHUB_ENV
shell: bash
- uses: n1hility/cancel-previous-runs@v3
with:
token: ${{ secrets.GITHUB_TOKEN }}
workflow: Test-coverage.yml
if: "!startsWith(github.ref, 'refs/tags/') && github.ref != 'refs/heads/master'"
- uses: actions/checkout@v4
- uses: r-lib/actions/setup-r@v2.9.0
- uses: r-lib/actions/setup-pandoc@v2.9.0
- uses: r-lib/actions/setup-r-dependencies@v2.9.0
with:
extra-packages: any::rcmdcheck, local::., any::covr, any::gridExtra
- name: Install cmdstan
run: |
cmdstanr::check_cmdstan_toolchain(fix = TRUE)
cmdstanr::install_cmdstan(cores = 2)
shell: Rscript {0}
- name: Test coverage (Linux)
if: runner.os == 'Linux'
run: covr::codecov(type = "tests")
shell: Rscript {0}
- name: Test coverage (Windows)
if: runner.os == 'Windows'
run: |
options(covr.gcov = 'C:/rtools44/mingw64/bin/gcov.exe');
covr::codecov(type = "tests", function_exclusions = "sample_mpi")
shell: Rscript {0}