Bump h5py from 3.11.0 to 3.12.1 #668
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| name: Usecase NFDI4Ing | |
| on: | |
| push: | |
| branches: [ main ] | |
| pull_request: | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Merge Notebook environment | |
| run: | | |
| cp .ci_support/environment.yml environment.yml | |
| tail --lines=+4 .ci_support/environment-notebooks.yml >> environment.yml | |
| echo -e "channels:\n - conda-forge\n" > .condarc | |
| - name: Setup Mambaforge | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| python-version: "3.12" | |
| miniforge-version: latest | |
| condarc-file: .condarc | |
| environment-file: environment.yml | |
| - name: Test | |
| shell: bash -l {0} | |
| timeout-minutes: 60 | |
| run: | | |
| bash .ci_support/pip_install.sh | |
| sudo apt-get install -y $(cat tests/usecases/NFDI4ING/apt.txt) | |
| cd tests/usecases/NFDI4ING | |
| papermill notebook.ipynb notebook.ipynb -k "python3" |