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Online NMF #2007

Merged
merged 161 commits into from
Jan 17, 2019
Merged

Online NMF #2007

merged 161 commits into from
Jan 17, 2019

Commits on Mar 29, 2018

  1. Implement first version of the algorithm

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Commits on Mar 30, 2018

  1. Fix variable names

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Commits on Apr 2, 2018

  1. Add support for streaming corpora

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  2. Add benchmark

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Commits on Apr 15, 2018

  1. Fix bugs, introduce batches, add images to the benchmark notebook

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Commits on Apr 22, 2018

  1. Update notebook

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  2. Improve model 

    1. Improved performance ~4x
2. LDA-like API
3. BOW compatibility
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  3. Merge remote-tracking branch 'upstream/develop' into online_nmf

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Commits on Apr 23, 2018

  1. Add show topics, change API

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  2. Add more LDA-like API

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  3. Fix logger name

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  4. Add more LDA API

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  5. Remove redundant method

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  6. Remove commented out lines

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  7. Fix flakes

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Commits on May 2, 2018

  1. Cythonize

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Commits on May 22, 2018

  1. Dramatically improve performance

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Commits on Jun 2, 2018

  1. Add parameters, improve accuracy and speed

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Commits on Jun 5, 2018

  1. Remove redundant W copying

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  2. Fix random seed again

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Commits on Jun 12, 2018

  1. Optimize E/M step

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Commits on Jun 13, 2018

  1. Add an eval_every option, use softmax for normalization

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  2. Fixes

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  3. Improve notebook examples a bit

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  4. Fix eval_every

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Commits on Jun 16, 2018

  1. Return outliers

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  2. Optimizations

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  3. Experimenting with loss

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Commits on Aug 14, 2018

  1. Merge remote-tracking branch 'upstream/develop' into online_nmf

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  2. Fix PEP8

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  3. Return nmf import

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Commits on Aug 20, 2018

  1. Revert "Return nmf import" 

    This reverts commit 1c3a064
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Commits on Aug 27, 2018

  1. Fix

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  2. Merge remote-tracking branch 'upstream/develop' into online_nmf

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  3. Fix minimum_probability & info -> debug logs

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  4. Compute metrics

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Commits on Aug 28, 2018

  1. Count error on-the-fly

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  2. Speed optimizations, changed error functions

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  3. Beat LDA

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  4. Outperform sklearn in speed (WTF)

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  5. Remove redundant arg

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  6. Add Olivietti faces

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  7. Remove redundant code

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  8. Add Topics

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  9. Make it pretty

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  10. Fix wrapper

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Commits on Aug 30, 2018

  1. Save corpus & dict, minor fixes

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Commits on Aug 31, 2018

  1. Add RandomCorpus

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  2. Dense -> sparse

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  3. First doc2dense

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  4. Fix csc again

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  5. Fix len

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Commits on Sep 12, 2018

  1. Experimenting

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  2. Revert "Experimenting" 

    This reverts commit 7a3ef47.
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  3. Fix evaluation

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Commits on Sep 23, 2018

  1. Sparse speedup

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Commits on Sep 25, 2018

  1. Improve performance

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  2. Divide A and B again

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    anotherbugmaster committed Sep 25, 2018
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  3. Fix A and B computation bug

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  4. Sparsify W init

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  5. Experimenting

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  6. New norm

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  7. Sparse threshold -> sparse coefficient

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Commits on Sep 26, 2018

  1. Optimize residuals computation

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  2. Fix residuals bug

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  3. W speedup

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  4. Experiment

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  5. Revert changes a bit

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  6. Fix corpus

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  7. Fix init error|

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  8. Merge branch 'online_nmf' of github.com:anotherbugmaster/gensim into … 

    …online_nmf
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  9. Resolve conflict

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  10. Fix corpus iteration issue

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Commits on Oct 7, 2018

  1. Switch to numpy algos

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  2. Merge upstream

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  3. Train on wikipedia

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Commits on Oct 9, 2018

  1. Sparse coef -> density. More stable way to sparsify W matrix

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  2. Merge branch 'online_nmf' of github.com:anotherbugmaster/gensim into … 

    …online_nmf
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  3. Return old sparse algo

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  4. Max

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Commits on Oct 10, 2018

  1. Optimizations

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  2. Fix A and B computation

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  3. Fix A and B normalization

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Commits on Oct 23, 2018

  1. Add random_state

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  2. Infer id2word

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Commits on Nov 6, 2018

  1. Fix tests

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Commits on Nov 14, 2018

  1. Document __init__

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  2. Document whole nmf

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  3. Merge remote-tracking branch 'upstream/develop' into online_nmf

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  4. Remove unnecessary comments

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  5. Add tutorial notebook

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Commits on Nov 20, 2018

  1. Document __init__

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Commits on Nov 28, 2018

  1. Fix flake version

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  2. Fix flake warning

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  3. Remove comments, reverse parallelization order

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  4. Add NMF's cython extension to setup.py

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  5. Fix imports, add solve_r function

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  6. Remove comments

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  7. Add docstrings

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  8. Common corpus and common dictionary

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  9. Remove redundant test

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  10. Add signature flag

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  11. Add files to manifest

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Commits on Nov 29, 2018

  1. Fix flake8

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  2. Fix atol value

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  3. Implement top topics

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Commits on Dec 10, 2018

  1. Add rst files

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Commits on Dec 11, 2018

  1. Merge remote-tracking branch 'upstream/develop' into online_nmf

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  2. Fix appveyor issue

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  3. Fix cython error

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Commits on Dec 12, 2018

  1. Merge remote-tracking branch 'upstream/develop' into online_nmf

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  2. Fix fmax/fmin not being on win-python27

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  3. Add word transformation test

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Commits on Dec 21, 2018

  1. Improve readability of residuals computation

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  2. Merge remote-tracking branch 'upstream/develop' into online_nmf

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  3. Fix tests

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  4. A few fixes

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  5. Blank line at the end of each docstring

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  6. Add blank line

    @anotherbugmaster
    anotherbugmaster committed Dec 21, 2018
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  7. Add the paper reference

    @anotherbugmaster
    anotherbugmaster committed Dec 21, 2018
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  8. Fix long line

    @anotherbugmaster
    anotherbugmaster committed Dec 21, 2018
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Commits on Dec 30, 2018

  1. Add log_perplexity

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Commits on Jan 7, 2019

  1. Merge remote-tracking branch 'remotes/upstream/develop' into online_nmf

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Commits on Jan 9, 2019

  1. Add NMF and LDA comparison table

    @anotherbugmaster
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  2. Change the sign of log perplexity

    @anotherbugmaster
    anotherbugmaster committed Jan 9, 2019
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  3. Add Sklearn NMF comparison

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  4. Merge sklearn and tm tables

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Commits on Jan 10, 2019

  1. Add F1

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  2. Remove _solve_r

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  3. Merge tutorial and benchmark

    @anotherbugmaster
    anotherbugmaster committed Jan 10, 2019
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  4. Identation's back

    @anotherbugmaster
    anotherbugmaster committed Jan 10, 2019
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  5. Optimize optimizers

    @anotherbugmaster
    anotherbugmaster committed Jan 10, 2019
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  6. Remove unnecessary pic

    @anotherbugmaster
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  7. Optimize memory consumption

    @anotherbugmaster
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  8. Add docstring

    @anotherbugmaster
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  9. Optimize get_topic_words

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  10. Merge remote-tracking branch 'upstream/develop' into online_nmf

    @anotherbugmaster
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  11. Fix tests

    @anotherbugmaster
    anotherbugmaster committed Jan 10, 2019
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  12. Fix flake8

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Commits on Jan 11, 2019

  1. Add missing test

    @anotherbugmaster
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  2. Code review fixes

    @anotherbugmaster
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  3. n_tokens -> num_tokens

    @anotherbugmaster
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  4. [skip ci] Add explicit normalize parameter

    @anotherbugmaster
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  5. [skip ci] Add explicit normalize parameter[2]

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  6. [skip ci] Update tutorial notebook

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  7. [skip ci] [WIP] Update wikipedia notebook

    @anotherbugmaster
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Commits on Jan 15, 2019

  1. Merge branch 'online_nmf' of github.com:anotherbugmaster/gensim into … 

    …online_nmf
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  2. Merge remote-tracking branch 'upstream/develop' into online_nmf

    @anotherbugmaster
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  3. Add more description and metrics

    @anotherbugmaster
    anotherbugmaster committed Jan 15, 2019
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  4. [skip ci] Fix log_probabiliy

    @anotherbugmaster
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  5. Multiple format fixes in notebook, outputs cleared til tomorrow

    @anotherbugmaster
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Commits on Jan 16, 2019

  1. Merge remote-tracking branch 'upstream/develop' into online_nmf

    @menshikh-iv
    menshikh-iv committed Jan 16, 2019
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  2. Train on full corpus

    @anotherbugmaster
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  3. Merge branch 'online_nmf' of github.com:anotherbugmaster/gensim into … 

    …online_nmf
    @anotherbugmaster
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  4. [skip ci] Remove disclaimer

    @anotherbugmaster
    anotherbugmaster committed Jan 16, 2019
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  5. Add RAM usage stats

    @anotherbugmaster
    anotherbugmaster committed Jan 16, 2019
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  6. Native 20-newsgroups and additional text

    @anotherbugmaster
    anotherbugmaster committed Jan 16, 2019
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Commits on Jan 17, 2019

  1. Truncate outputs

    @anotherbugmaster
    anotherbugmaster committed Jan 17, 2019
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  2. Merge remote-tracking branch 'upstream/develop' into online_nmf

    @anotherbugmaster
    anotherbugmaster committed Jan 17, 2019
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  3. Fix last cell formatting

    @anotherbugmaster
    anotherbugmaster committed Jan 17, 2019
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  4. [skip ci] Change model hyperparameters back

    @anotherbugmaster
    anotherbugmaster committed Jan 17, 2019
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