Skip to content

@ScalableCytometryImageProcessing Scalable Cytometry Image Processing

Change the repository type filter

All

    Repositories list

    7 repositories

    • SCIP

      Public
      Scalable Cytometry Image Processing (SCIP) is an open-source tool that implements an image processing pipeline on top of Dask, a distributed computing framework written in Python. SCIP performs projection, illumination correction, image segmentation and masking, and feature extraction.
      distributed-computingdaskbioimage-analysisdask-distributedcytometry-analysis-pipeline
      Python
      •
      GNU General Public License v3.0
      •0•7•13•0•Updated May 22, 2024May 22, 2024

    • SCIP-use-case-workflows

      Public
      Snakemake workflows for SCIP use cases.
      Jupyter Notebook
      •
      Apache License 2.0
      •1•0•0•0•Updated Mar 16, 2023Mar 16, 2023

    • benchmark

      Public
      Benchmark code for SCIP
      Jupyter Notebook
      •0•0•0•0•Updated Jul 12, 2022Jul 12, 2022

    • dask

      Public
      Parallel computing with task scheduling
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1.7k•0•0•0•Updated Jul 7, 2022Jul 7, 2022

    • dask-mpi

      Public
      Deploy Dask using MPI4Py
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •29•0•0•0•Updated Jul 4, 2022Jul 4, 2022

    • distributed

      Public
      A distributed task scheduler for Dask
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •718•0•0•0•Updated Nov 22, 2021Nov 22, 2021

    • dask-jobqueue

      Public
      Deploy Dask on job schedulers like PBS, SLURM, and SGE
      Python
      •
      Other
      •143•0•0•0•Updated Sep 2, 2021Sep 2, 2021