R: upgrade to 4.4.1 #2103
Workflow file for this run
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| name: Validate | |
| on: | |
| push: | |
| branches: | |
| - 3.x | |
| pull_request: | |
| branches: | |
| - 3.x | |
| env: | |
| SKIP_CI_SPECS: | | |
| components/fs/lustre-client/SPECS/lustre.spec | |
| components/parallel-libs/trilinos/SPECS/trilinos.spec | |
| jobs: | |
| check_spec: | |
| env: | |
| JOB_SKIP_CI_SPECS: | | |
| components/admin/ohpc-filesystem/SPECS/ohpc-filesystem.spec | |
| runs-on: ubuntu-latest | |
| container: | |
| image: docker.io/library/rockylinux:9 | |
| steps: | |
| - name: Setup | |
| run: | | |
| dnf install -y epel-release git python3 | |
| - uses: actions/checkout@v4 | |
| - id: files | |
| uses: Ana06/get-changed-files@v2.3.0 | |
| - name: Validate Changes | |
| run: | | |
| export SKIP_CI_SPECS="${{ env.SKIP_CI_SPECS }}${{ env.JOB_SKIP_CI_SPECS }}" | |
| tests/ci/check_spec.py ${{ steps.files.outputs.added_modified }} | |
| lint_markdown: | |
| name: Run markdown linter | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Lint markdown | |
| uses: DavidAnson/markdownlint-cli2-action@v15 | |
| with: | |
| globs: | | |
| README.md | |
| CONTRIBUTING.md | |
| lint: | |
| strategy: | |
| matrix: | |
| step: [codespell, flake8, shellcheck, whitespace, shfmt] | |
| name: Run ${{ matrix.step }} linter | |
| runs-on: ubuntu-latest | |
| container: | |
| image: registry.fedoraproject.org/fedora:latest | |
| steps: | |
| - name: Setup | |
| run: dnf -y install codespell make python3-flake8 ShellCheck shfmt | |
| - uses: actions/checkout@v4 | |
| - name: Run ${{ matrix.step }} | |
| run: make -C tests/ci/ ${{ matrix.step }}-lint | |
| build_on_rhel: | |
| strategy: | |
| matrix: | |
| compiler: [gnu14, intel] | |
| runs-on: ubuntu-latest | |
| name: Build on RHEL (${{ matrix.compiler}}) | |
| container: | |
| image: docker.io/library/rockylinux:9 | |
| volumes: | |
| - /usr:/host/usr | |
| - /opt:/host/opt | |
| steps: | |
| - name: Delete unneeded tools on the host | |
| # Needed to have enough space to install the Intel compiler | |
| run: | | |
| rm -rf /host/usr/share/dotnet /host/usr/local/lib/android /host/opt/ghc | |
| - name: Install git | |
| run: dnf -y install git | |
| - uses: actions/checkout@v4 | |
| - name: Setup | |
| run: tests/ci/prepare-ci-environment.sh ${{ matrix.compiler }} | |
| - id: files | |
| uses: Ana06/get-changed-files@v2.3.0 | |
| - name: Validate Build | |
| run: | | |
| if [ "${{ matrix.compiler }}" == "intel" ]; then | |
| export SKIP_CI_SPECS="${{ env.SKIP_CI_SPECS }} components/serial-libs/openblas/SPECS/openblas.spec" | |
| export SKIP_CI_SPECS="${SKIP_CI_SPECS} components/dev-tools/scipy/SPECS/python-scipy.spec" | |
| export SKIP_CI_SPECS="${SKIP_CI_SPECS} components/serial-libs/R/SPECS/R.spec" | |
| fi | |
| . /etc/profile.d/lmod.sh | |
| tests/ci/run_build.py ohpc ${{ steps.files.outputs.added_modified }} --compiler-family ${{ matrix.compiler }} | |
| touch /tmp/empty | |
| - uses: actions/upload-artifact@v4 | |
| with: | |
| name: rhel-rpms-${{ matrix.compiler }} | |
| retention-days: 1 | |
| path: | | |
| /home/ohpc/rpmbuild/RPMS/noarch/*rpm | |
| /home/ohpc/rpmbuild/RPMS/x86_64/*rpm | |
| /tmp/empty | |
| test_on_rhel: | |
| strategy: | |
| matrix: | |
| compiler: [gnu14, intel] | |
| runs-on: ubuntu-latest | |
| name: Test on RHEL | |
| env: | |
| JOB_SKIP_CI_SPECS: | | |
| components/perf-tools/likwid/SPECS/likwid.spec | |
| container: | |
| image: docker.io/library/rockylinux:9 | |
| options: --privileged | |
| volumes: | |
| - /usr:/host/usr | |
| - /opt:/host/opt | |
| needs: build_on_rhel | |
| steps: | |
| - name: Delete unneeded tools on the host | |
| # Needed to have enough space to install the Intel compiler | |
| run: | | |
| rm -rf /host/usr/share/dotnet /host/usr/local/lib/android /host/opt/ghc | |
| - name: Install git | |
| run: dnf -y install git | |
| - uses: actions/checkout@v4 | |
| - name: Setup | |
| run: tests/ci/prepare-ci-environment.sh ${{ matrix.compiler }} | |
| - id: files | |
| uses: Ana06/get-changed-files@v2.3.0 | |
| - uses: actions/download-artifact@v4 | |
| with: | |
| name: rhel-rpms-${{ matrix.compiler }} | |
| path: /home/ohpc/rpmbuild/RPMS | |
| - name: Run CI Tests | |
| run: | | |
| export SKIP_CI_SPECS="${{ env.SKIP_CI_SPECS }}${{ env.JOB_SKIP_CI_SPECS }}" | |
| if [ "${{ matrix.compiler }}" == "intel" ]; then | |
| export SKIP_CI_SPECS="${SKIP_CI_SPECS} components/serial-libs/openblas/SPECS/openblas.spec" | |
| export SKIP_CI_SPECS="${SKIP_CI_SPECS} components/dev-tools/scipy/SPECS/python-scipy.spec" | |
| export SKIP_CI_SPECS="${SKIP_CI_SPECS} components/serial-libs/R/SPECS/R.spec" | |
| fi | |
| . /etc/profile.d/lmod.sh | |
| chown ohpc -R tests | |
| tests/ci/setup_slurm_and_run_tests.sh ohpc ${{ matrix.compiler }} ${{ steps.files.outputs.added_modified }} | |
| - name: Upload Test Results | |
| # To display test results from forked repositories they need to | |
| # be uploaded and then analyzed. | |
| if: always() | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: test-results-${{ matrix.compiler }} | |
| retention-days: 1 | |
| path: tests/**/*.log.xml | |
| build_on_openEuler: | |
| runs-on: ubuntu-latest | |
| name: Build on openEuler | |
| container: | |
| image: docker.io/openeuler/openeuler:22.03-lts-sp3 | |
| steps: | |
| - name: Switch repo | |
| run: sed -i "s@repo.openeuler.org@repo.huaweicloud.com/openeuler@g" /etc/yum.repos.d/openEuler.repo | |
| - name: Install git | |
| run: dnf -y install git | |
| - uses: actions/checkout@v4 | |
| - name: Setup | |
| run: tests/ci/prepare-ci-environment.sh | |
| - id: files | |
| uses: Ana06/get-changed-files@v2.3.0 | |
| - name: Validate Build | |
| run: | | |
| . /etc/profile.d/lmod.sh | |
| tests/ci/run_build.py ohpc ${{ steps.files.outputs.added_modified }} | |
| touch /tmp/empty | |
| - uses: actions/upload-artifact@v4 | |
| with: | |
| name: openEuler-rpms | |
| retention-days: 1 | |
| path: | | |
| /home/ohpc/rpmbuild/RPMS/noarch/*rpm | |
| /home/ohpc/rpmbuild/RPMS/x86_64/*rpm | |
| /tmp/empty | |
| test_on_openEuler: | |
| strategy: | |
| matrix: | |
| compiler: [gnu14] | |
| env: | |
| JOB_SKIP_CI_SPECS: | | |
| components/runtimes/charliecloud/SPECS/charliecloud.spec | |
| components/perf-tools/likwid/SPECS/likwid.spec | |
| runs-on: ubuntu-latest | |
| name: Test on openEuler | |
| container: | |
| image: docker.io/openeuler/openeuler:22.03-lts-sp3 | |
| needs: build_on_openEuler | |
| steps: | |
| - name: Switch repo | |
| run: sed -i "s@repo.openeuler.org@repo.huaweicloud.com/openeuler@g" /etc/yum.repos.d/openEuler.repo | |
| - name: Install git | |
| run: dnf -y install git | |
| - uses: actions/checkout@v4 | |
| - name: Setup | |
| run: tests/ci/prepare-ci-environment.sh | |
| - id: files | |
| uses: Ana06/get-changed-files@v2.3.0 | |
| - uses: actions/download-artifact@v4 | |
| with: | |
| name: openEuler-rpms | |
| path: /home/ohpc/rpmbuild/RPMS | |
| - name: Run CI Tests | |
| run: | | |
| export SKIP_CI_SPECS="${{ env.SKIP_CI_SPECS }}${{ env.JOB_SKIP_CI_SPECS }}" | |
| . /etc/profile.d/lmod.sh | |
| chown ohpc -R tests | |
| tests/ci/setup_slurm_and_run_tests.sh ohpc ${{ matrix.compiler }} ${{ steps.files.outputs.added_modified }} | |
| build_on_leap: | |
| runs-on: ubuntu-latest | |
| name: Build on LEAP | |
| container: | |
| image: registry.opensuse.org/opensuse/leap:15.5 | |
| steps: | |
| - name: Install git | |
| run: zypper -n update; zypper -n install git | |
| - uses: actions/checkout@v4 | |
| - name: Setup | |
| run: tests/ci/prepare-ci-environment.sh | |
| - id: files | |
| uses: Ana06/get-changed-files@v2.3.0 | |
| - name: Validate Build | |
| run: | | |
| . /etc/profile.d/lmod.sh | |
| tests/ci/run_build.py ohpc ${{ steps.files.outputs.added_modified }} | |
| touch /tmp/empty | |
| - uses: actions/upload-artifact@v4 | |
| with: | |
| name: leap-rpms | |
| retention-days: 1 | |
| path: | | |
| /home/ohpc/rpmbuild/RPMS/noarch/*rpm | |
| /home/ohpc/rpmbuild/RPMS/x86_64/*rpm | |
| /tmp/empty | |
| test_on_leap: | |
| strategy: | |
| matrix: | |
| compiler: [gnu14] | |
| env: | |
| JOB_SKIP_CI_SPECS: | | |
| components/runtimes/charliecloud/SPECS/charliecloud.spec | |
| components/perf-tools/likwid/SPECS/likwid.spec | |
| runs-on: ubuntu-latest | |
| name: Test on LEAP | |
| container: | |
| image: registry.opensuse.org/opensuse/leap:15.5 | |
| needs: build_on_leap | |
| steps: | |
| - name: Install git | |
| run: zypper -n update; zypper -n install git | |
| - uses: actions/checkout@v4 | |
| - name: Setup | |
| run: tests/ci/prepare-ci-environment.sh | |
| - id: files | |
| uses: Ana06/get-changed-files@v2.3.0 | |
| - uses: actions/download-artifact@v4 | |
| with: | |
| name: leap-rpms | |
| path: /home/ohpc/rpmbuild/RPMS | |
| - name: Run CI Tests | |
| run: | | |
| export SKIP_CI_SPECS="${{ env.SKIP_CI_SPECS }}${{ env.JOB_SKIP_CI_SPECS }}" | |
| . /etc/profile.d/lmod.sh | |
| chown ohpc -R tests | |
| tests/ci/setup_slurm_and_run_tests.sh ohpc ${{ matrix.compiler }} ${{ steps.files.outputs.added_modified }} | |
| event_file: | |
| name: "Event File" | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Upload | |
| if: always() | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: event-file | |
| retention-days: 1 | |
| path: ${{ github.event_path }} |