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1.0.6

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@nuno-agostinho nuno-agostinho released this 19 Jan 17:46
  • Update tutorials with more relevant and complex examples
  • Update minimum versions required of highcharter (0.5.0) and shiny (1.0.0):
    • Fix function usage as according to new version of highcharter
    • More options available when exporting plots (PNG, JPEG, SVG, XLS and
      CSV)
  • Faster alternative splicing quantification
  • Differential splicing analysis:
    • Fix major bug where samples could be placed in the wrong groups
    • Shorten speed of the calculation for the optimal PSI cut-off that
      minimises the survival difference
    • Fix not performing statistical tests for two selected sample types
      while analysing a single event with three or more sample types
    • Fix differential analysis on one splicing event not working when using
      diffAnalyses() function
    • Fix differential analysis not showing for individual events before
      navigating to the page where the analysis is performed for all events
    • Improve readability and information of statistical tests for single
      events
  • Principal component analysis:
    • Shorten time taken to calculate principal components and to render the
      loadings plot
    • Fix loadings plot error when rendering some principal components
  • Survival analysis:
    • Fix incorrect number of patients from the survival groups in the
      contextual information for the selected cut-off (below the slider)
    • Improve how alternative splicing quantification is assigned to
      patients based on their samples
  • Protein annotation:
    • Warn user when trying to render proteins with no domains