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[FIX] Require recent templateflow, select correct aparc dseg.tsv #420

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merged 2 commits into from
Mar 22, 2024

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codecov bot commented Mar 20, 2024

Codecov Report

Attention: Patch coverage is 0% with 1 lines in your changes are missing coverage. Please review.

Project coverage is 78.59%. Comparing base (a2b76f9) to head (ac0c57f).
Report is 13 commits behind head on master.

Files Patch % Lines
smriprep/cli/run.py 0.00% 1 Missing ⚠️
Additional details and impacted files
@@             Coverage Diff             @@
##           master     #420       +/-   ##
===========================================
+ Coverage   62.99%   78.59%   +15.59%     
===========================================
  Files          24       30        +6     
  Lines        1927     2088      +161     
  Branches      248      248               
===========================================
+ Hits         1214     1641      +427     
+ Misses        678      415      -263     
+ Partials       35       32        -3     
Flag Coverage Δ
ds005 ∅ <ø> (?)
ds054 46.28% <0.00%> (?)
pytest 67.81% <0.00%> (?)

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@effigies
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What a mess. I think I know the issue. Let me push to your branch...

@effigies effigies changed the title [FIX] copy of dseg.tsv following templateflow fsaverage update [FIX] Require recent templateflow, select correct aparc dseg.tsv Mar 22, 2024
@effigies effigies merged commit 3b8d125 into nipreps:master Mar 22, 2024
16 of 17 checks passed
effigies added a commit that referenced this pull request Mar 23, 2024
0.15.0 (March 22, 2024)

New feature release in the 0.15.x series.

This release adds the workflow configuration option and CLI option
to reuse existing FreeSurfer outputs without attempting to resume.
This should allow for using longitudinal or non-standard pipelines
(for example, FastSurfer) without additional tooling for each variant.

* FIX: Patch version for smriprep-docker (#424)
* FIX: Require recent templateflow, select correct aparc dseg.tsv (#420)
* ENH: Add --fs-no-resume option to reuse existing FreeSurfer outputs without resuming (#393)
* MNT: set copyright owner in LICENSE file (#426)
* MNT: Apply Repo-Review suggestions (#422)
* CI: Small cleanups to GHA (#423)
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2 participants