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Dev #472

Closed
wants to merge 50 commits into from
Closed

Dev #472

wants to merge 50 commits into from

Commits on Dec 6, 2021

  1. fix interval name and boolean flag

    Smith Nicholas committed Dec 6, 2021
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  2. remove boolean flag

    Smith Nicholas committed Dec 6, 2021
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  3. rename steps to match schema

    Smith Nicholas committed Dec 6, 2021
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  4. print

    Smith Nicholas committed Dec 6, 2021
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  5. print

    Smith Nicholas committed Dec 6, 2021
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  6. print

    Smith Nicholas committed Dec 6, 2021
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  7. print

    Smith Nicholas committed Dec 6, 2021
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  8. print

    Smith Nicholas committed Dec 6, 2021
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  9. rename if statements to match step_schema

    Smith Nicholas committed Dec 6, 2021
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  10. rename variantcalling -> variant_calling

    Smith Nicholas committed Dec 6, 2021
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  11. intervals_bed for all tuples

    Smith Nicholas committed Dec 6, 2021
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  12. match argument order

    Smith Nicholas committed Dec 6, 2021
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  13. output intervals_bed

    Smith Nicholas committed Dec 6, 2021
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  14. print

    Smith Nicholas committed Dec 6, 2021
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  15. remove forced '_'

    Smith Nicholas committed Dec 6, 2021
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  16. print

    Smith Nicholas committed Dec 6, 2021
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  17. print

    Smith Nicholas committed Dec 6, 2021
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  18. print

    Smith Nicholas committed Dec 6, 2021
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  19. fix variable order

    Smith Nicholas committed Dec 6, 2021
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  20. uncomment germline variant_calling options

    Smith Nicholas committed Dec 6, 2021
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  21. uncomment germline variant_calling options

    Smith Nicholas committed Dec 6, 2021
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  22. uncomment germline variant_calling options

    Smith Nicholas committed Dec 6, 2021
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  23. uncomment germline variant_calling options

    Smith Nicholas committed Dec 6, 2021
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  24. uncomment germline variant_calling options

    Smith Nicholas committed Dec 6, 2021
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  25. uncomment germline variant_calling options

    Smith Nicholas committed Dec 6, 2021
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  26. publish_files

    Smith Nicholas committed Dec 6, 2021
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  27. format

    Smith Nicholas committed Dec 6, 2021
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  28. format

    Smith Nicholas committed Dec 6, 2021
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  29. format

    Smith Nicholas committed Dec 6, 2021
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  30. format

    Smith Nicholas committed Dec 6, 2021
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  31. format

    Smith Nicholas committed Dec 6, 2021
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  32. format

    Smith Nicholas committed Dec 6, 2021
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  33. format

    Smith Nicholas committed Dec 6, 2021
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  34. format

    Smith Nicholas committed Dec 6, 2021
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  35. format

    Smith Nicholas committed Dec 6, 2021
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  36. format

    Smith Nicholas committed Dec 6, 2021
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  37. format

    Smith Nicholas committed Dec 6, 2021
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  38. format

    Smith Nicholas committed Dec 6, 2021
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  39. format

    Smith Nicholas committed Dec 6, 2021
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  40. format

    Smith Nicholas committed Dec 6, 2021
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  41. format

    Smith Nicholas committed Dec 6, 2021
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  42. format

    Smith Nicholas committed Dec 6, 2021
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  43. format

    Smith Nicholas committed Dec 6, 2021
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  44. format

    Smith Nicholas committed Dec 6, 2021
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Commits on Dec 7, 2021

  1. linting

    Smith Nicholas committed Dec 7, 2021
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  2. linting

    Smith Nicholas committed Dec 7, 2021
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Commits on Dec 8, 2021

  1. Merge pull request #1 from nickhsmith/GHGA 

    Ghga
    @nickhsmith
    nickhsmith committed Dec 8, 2021
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Commits on Dec 13, 2021

  1. update publishDir

    Smith Nicholas committed Dec 13, 2021
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  2. linting

    Smith Nicholas committed Dec 13, 2021
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  3. Merge branch 'dev' into dev

    @nickhsmith
    nickhsmith committed Dec 13, 2021
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