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revert wfmash to v0.10.4 #581

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revert wfmash to v0.10.4

revert wfmash to v0.10.4 #581

Triggered via pull request March 25, 2024 14:01
@subwaystationsubwaystation
synchronize #192
wfmash_0104
Status Cancelled
Total duration 1m 56s
Artifacts –

ci.yml

on: pull_request
Matrix: Run pipeline with community parameters
Matrix: Run pipeline with metric parameter suffixes
Matrix: Run pipeline with smoothxg parameters
Matrix: Run pipeline with test data
Matrix: Run pipeline with vg deconstruct parameters
Matrix: Run pipeline with wfmash_chunks parameters
Matrix: Run pipeline with wfmash_only parameters
Matrix: Run pipeline with wfmash_sparse_map parameters
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22 errors and 1 warning
Run pipeline with test data (latest-everything)
Canceling since a higher priority waiting request for 'nf-core CI-192' exists
Run pipeline with test data (23.04.0)
Canceling since a higher priority waiting request for 'nf-core CI-192' exists
Run pipeline with wfmash_sparse_map parameters (--wfmash_sparse_map 0.5)
Canceling since a higher priority waiting request for 'nf-core CI-192' exists
Run pipeline with wfmash_sparse_map parameters (--wfmash_sparse_map 0.5)
The operation was canceled.
Run pipeline with wfmash_sparse_map parameters (--wfmash_sparse_map auto)
Canceling since a higher priority waiting request for 'nf-core CI-192' exists
Run pipeline with community parameters (--communities --vcf_spec "gi|568815561:5,gi|568815567:25")
Canceling since a higher priority waiting request for 'nf-core CI-192' exists
Run pipeline with wfmash_sparse_map parameters (--wfmash_sparse_map auto)
The operation was canceled.
Run pipeline with community parameters (--communities --vcf_spec "gi|568815561:5,gi|568815567:25")
The operation was canceled.
Run pipeline with community parameters (--communities)
Canceling since a higher priority waiting request for 'nf-core CI-192' exists
Run pipeline with community parameters (--communities)
The operation was canceled.
Run pipeline with metric parameter suffixes (--wfmash_sequence_length 8k --wfmash_block_length 38...
Canceling since a higher priority waiting request for 'nf-core CI-192' exists
Run pipeline with metric parameter suffixes (--wfmash_sequence_length 8k --wfmash_block_length 38...
The operation was canceled.
Run pipeline with vg deconstruct parameters (--vcf_spec "gi|568815561:5,gi|568815567:25")
Canceling since a higher priority waiting request for 'nf-core CI-192' exists
Run pipeline with vg deconstruct parameters (--vcf_spec "gi|568815561:5,gi|568815567:25")
The operation was canceled.
Run pipeline with community parameters (--communities --wfmash_chunks 2)
Canceling since a higher priority waiting request for 'nf-core CI-192' exists
Run pipeline with community parameters (--communities --wfmash_chunks 2)
The operation was canceled.
Run pipeline with wfmash_chunks parameters (--wfmash_chunks 2)
Canceling since a higher priority waiting request for 'nf-core CI-192' exists
Run pipeline with wfmash_chunks parameters (--wfmash_chunks 2)
The operation was canceled.
Run pipeline with smoothxg parameters (--smoothxg_poa_params asm10)
Canceling since a higher priority waiting request for 'nf-core CI-192' exists
Run pipeline with smoothxg parameters (--smoothxg_poa_params asm10)
The operation was canceled.
Run pipeline with smoothxg parameters (--smoothxg_write_maf --smoothxg_poa_length 100,200,300 --s...
Canceling since a higher priority waiting request for 'nf-core CI-192' exists
Run pipeline with smoothxg parameters (--smoothxg_write_maf --smoothxg_poa_length 100,200,300 --s...
The operation was canceled.
Run pipeline with wfmash_only parameters (--wfmash_only)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.