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Important! Template update for nf-core/tools v2.14.1 #689

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Important! Template update for nf-core/tools v2.14.1

Important! Template update for nf-core/tools v2.14.1 #689

Triggered via pull request September 17, 2024 10:33
@yuukiiwayuukiiwa
synchronize #268
nf-core-template-merge-2.14.1
Status Failure
Total duration 2m 38s
Artifacts –

ci.yml

on: pull_request
Matrix: Run parameter tests
Matrix: Run profile tests
Matrix: Run pipeline with test data
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17 errors and 7 warnings
Run profile tests (test_bc_nodx)
Process completed with exit code 1.
Run profile tests (test_nobc_nodx_stringtie)
Process completed with exit code 1.
Run profile tests (test_nobc_nodx_rnamod)
Process completed with exit code 1.
Run profile tests (test_nobc_dx)
The job was canceled because "test_bc_nodx" failed.
Run profile tests (test_nobc_dx)
Process completed with exit code 1.
Run parameter tests (--skip_quantification)
Process completed with exit code 1.
Run parameter tests (--skip_qc)
Process completed with exit code 1.
Run parameter tests (--skip_alignment)
The job was canceled because "_--skip_quantification" failed.
Run parameter tests (--skip_alignment)
Process completed with exit code 1.
Run profile tests (test_nobc_nodx_noaln)
The job was canceled because "test_bc_nodx" failed.
Run profile tests (test_nobc_nodx_noaln)
The operation was canceled.
Run parameter tests (--aligner graphmap2)
The job was canceled because "_--skip_quantification" failed.
Run parameter tests (--aligner graphmap2)
Process completed with exit code 1.
Run profile tests (test_nobc_nodx_vc)
The job was canceled because "test_bc_nodx" failed.
Run profile tests (test_nobc_nodx_vc)
The operation was canceled.
Run pipeline with test data (latest-everything)
Process completed with exit code 1.
Run pipeline with test data (23.04.0)
The job was canceled because "latest-everything" failed.
Run profile tests (test_bc_nodx)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Run profile tests (test_nobc_nodx_stringtie)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Run profile tests (test_nobc_nodx_rnamod)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Run parameter tests (--skip_quantification)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run parameter tests (--skip_quantification)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Run parameter tests (--skip_qc)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run parameter tests (--skip_qc)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/