Use long form docker.io address for Ubuntu (#3358)

nf-core · May 2, 2023 · 38b1670 · 38b1670
1 parent b9829e1
commit 38b1670
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Showing 10 changed files with 10 additions and 10 deletions.
diff --git a/modules/nf-core/cat/fastq/main.nf b/modules/nf-core/cat/fastq/main.nf
@@ -5,7 +5,7 @@ process CAT_FASTQ {
     conda "conda-forge::sed=4.7"
     container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
         'https://depot.galaxyproject.org/singularity/ubuntu:20.04' :
-        'docker.io/ubuntu:20.04' }"
+        'docker.io/library/ubuntu:20.04' }"
 
     input:
     tuple val(meta), path(reads, stageAs: "input*/*")

diff --git a/modules/nf-core/custom/tabulartogseacls/main.nf b/modules/nf-core/custom/tabulartogseacls/main.nf
@@ -5,7 +5,7 @@ process CUSTOM_TABULARTOGSEACLS {
     conda "conda-forge::coreutils=9.1"
     container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
         'https://depot.galaxyproject.org/singularity/ubuntu:20.04' :
-        'docker.io/ubuntu:20.04' }"
+        'docker.io/library/ubuntu:20.04' }"
 
     input:
     tuple val(meta), path(samples)

diff --git a/modules/nf-core/custom/tabulartogseagct/main.nf b/modules/nf-core/custom/tabulartogseagct/main.nf
@@ -5,7 +5,7 @@ process CUSTOM_TABULARTOGSEAGCT {
     conda "conda-forge::coreutils=9.1"
     container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
         'https://depot.galaxyproject.org/singularity/ubuntu:20.04' :
-        'docker.io/ubuntu:20.04' }"
+        'docker.io/library/ubuntu:20.04' }"
 
     input:
     tuple val(meta), path(tabular)

diff --git a/modules/nf-core/gnu/sort/main.nf b/modules/nf-core/gnu/sort/main.nf
@@ -5,7 +5,7 @@ process GNU_SORT {
     conda "conda-forge::coreutils=9.1"
     container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
     'https://depot.galaxyproject.org/singularity/ubuntu:20.04' :
-    'docker.io/ubuntu:20.04' }"
+    'docker.io/library/ubuntu:20.04' }"
 
     input:
     tuple val(meta), path(input)

diff --git a/modules/nf-core/gunzip/main.nf b/modules/nf-core/gunzip/main.nf
@@ -5,7 +5,7 @@ process GUNZIP {
     conda "conda-forge::sed=4.7"
     container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
         'https://depot.galaxyproject.org/singularity/ubuntu:20.04' :
-        'docker.io/ubuntu:20.04' }"
+        'docker.io/library/ubuntu:20.04' }"
 
     input:
     tuple val(meta), path(archive)

diff --git a/modules/nf-core/igv/js/main.nf b/modules/nf-core/igv/js/main.nf
@@ -6,7 +6,7 @@ process IGV_JS {
     conda "conda-forge::sed=4.7"
     container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
         'https://depot.galaxyproject.org/singularity/ubuntu:20.04' :
-        'docker.io/ubuntu:20.04' }"
+        'docker.io/library/ubuntu:20.04' }"
 
     input:
     tuple val(meta), path(alignment), path(index)

diff --git a/modules/nf-core/md5sum/main.nf b/modules/nf-core/md5sum/main.nf
@@ -5,7 +5,7 @@ process MD5SUM {
     conda "conda-forge::coreutils=9.1"
     container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
         'https://depot.galaxyproject.org/singularity/ubuntu:20.04' :
-        'docker.io/ubuntu:20.04' }"
+        'docker.io/library/ubuntu:20.04' }"
 
     input:
     tuple val(meta), path(file)

diff --git a/modules/nf-core/shasum/main.nf b/modules/nf-core/shasum/main.nf
@@ -5,7 +5,7 @@ process SHASUM {
     conda "conda-forge::coreutils=9.1"
     container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
         'https://depot.galaxyproject.org/singularity/ubuntu:20.04' :
-        'docker.io/ubuntu:20.04' }"
+        'docker.io/library/ubuntu:20.04' }"
 
     input:
     tuple val(meta), path(file)

diff --git a/modules/nf-core/untar/main.nf b/modules/nf-core/untar/main.nf
@@ -5,7 +5,7 @@ process UNTAR {
     conda "conda-forge::sed=4.7 bioconda::grep=3.4 conda-forge::tar=1.34"
     container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
         'https://depot.galaxyproject.org/singularity/ubuntu:20.04' :
-        'docker.io/ubuntu:20.04' }"
+        'docker.io/library/ubuntu:20.04' }"
 
     input:
     tuple val(meta), path(archive)

diff --git a/modules/nf-core/untarfiles/main.nf b/modules/nf-core/untarfiles/main.nf
@@ -5,7 +5,7 @@ process UNTARFILES {
     conda "conda-forge::sed=4.7 bioconda::grep=3.4 conda-forge::tar=1.34"
     container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
         'https://depot.galaxyproject.org/singularity/ubuntu:20.04' :
-        'docker.io/ubuntu:20.04' }"
+        'docker.io/library/ubuntu:20.04' }"
 
     input:
     tuple val(meta), path(archive)