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Added Deeplc #269

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merged 21 commits into from
Jun 23, 2023
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1 change: 1 addition & 0 deletions CHANGELOG.md
Original file line number Diff line number Diff line change
Expand Up @@ -8,6 +8,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
### `Added`

- Support for brukers tdf format by adding tdf2mzml converter [#263](https://github.com/nf-core/mhcquant/issues/263)
- DeepLC retention time prediction

### `Fixed`

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7 changes: 6 additions & 1 deletion bin/check_samplesheet.py
Original file line number Diff line number Diff line change
Expand Up @@ -28,7 +28,12 @@ class RowChecker:
VALID_FORMATS = (".raw", ".mzML", ".d")

def __init__(
self, id_col="ID", sample_col="Sample", condition_col="Condition", filename_col="ReplicateFileName", **kwargs
self,
id_col="ID",
sample_col="Sample",
condition_col="Condition",
filename_col="ReplicateFileName",
**kwargs,
):
"""
Initialize the row checker with the expected column names.
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