Skip to content

Commit

Permalink
Update main.nf
Browse files Browse the repository at this point in the history
Co-authored-by: Daniel Straub <42973691+d4straub@users.noreply.github.com>
  • Loading branch information
FriederikeHanssen and d4straub committed Jan 12, 2022
1 parent 6fa74d4 commit 0f7bf76
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion main.nf
Original file line number Diff line number Diff line change
Expand Up @@ -98,7 +98,7 @@ if (params.input_paths){
if(params.index_files){ //Index files are provided

if (params.cram_files) {
exit 1, "Parameter 'params.cram_files' isn't compatible with 'params.index_files'!\n"
exit 1, "Parameter 'params.cram_files' isn't compatible with '--index_files'!\n"
}

Channel.fromFilePairs(params.input, flat:true, checkIfExists:true) { file -> file.name.replaceAll(/.bam|.bai$/,'') }
Expand Down

0 comments on commit 0f7bf76

Please sign in to comment.