Seasonal Coronaviruses

Phylogenies of human seasonal coronaviruses.

Built starting from the Nextstrain pathogen repository template.

Working on this repo

This repo is configured to use pre-commit, to help automatically catch common coding errors and syntax issues with changes before they are committed to the repo. . If you will be writing new code or otherwise working within this repo, please do the following to get started:

1. install pre-commit by running either python -m pip install pre-commit or brew install pre-commit, depending on your preferred package management solution
2. install the local git hooks by running pre-commit install from the root of the repo
3. when problems are detected, correct them in your local working tree before committing them.

Note that these pre-commit checks are also run in a GitHub Action when changes are pushed to GitHub, so correcting issues locally will prevent extra cycles of correction.