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Fixup: Add ambiguous month and day to date annotations #30

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May 9, 2024
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Fixup: Add ambiguous month and day to date annotations #30

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50 changes: 25 additions & 25 deletions ingest/defaults/annotations.tsv
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Original file line number Diff line number Diff line change
Expand Up @@ -9,26 +9,26 @@
# sequences of measles virus strains in the Edmonston vaccine lineage
# https://doi.org/10.1128/jvi.75.2.910-920.2001
AF266288 strain Measles strain Edmonston WT
AF266288 date 1954
AF266288 date 1954-XX-XX
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AF266288 region North America
AF266288 country USA
AF266288 division Massachusetts
AF266288 location Boston
AF266288 genotype_ncbi A
AF266287 strain Measles vaccine strain Moraten
AF266287 date 1954
AF266287 date 1954-XX-XX
AF266287 genotype_ncbi A
AF266290 strain Measles vaccine strain Zagreb
AF266290 date 1954
AF266290 date 1954-XX-XX
AF266290 genotype_ncbi A
AF266289 strain Measles vaccine strain Rubeovax
AF266289 date 1954
AF266289 date 1954-XX-XX
AF266289 genotype_ncbi A
AF266291 strain Measles vaccine strain Schwarz
AF266291 date 1954
AF266291 date 1954-XX-XX
AF266291 genotype_ncbi A
AF266286 strain Measles vaccine strain AIK-C
AF266286 date 1954
AF266286 date 1954-XX-XX
AF266286 genotype_ncbi A
#
# WHO genotype reference strains
Expand Down Expand Up @@ -118,31 +118,31 @@ U64582 strain MVi/Johannesburg.ZAF/0.88/1
X84865 strain MVs/Madrid.ESP/0.94(SSPE)
X84872 strain MVi/Erlangen.DEU/0.90
X84879 strain MVi/Goettingen.DEU/0.71
AF045212 date 1993
AF045217 date 1994
AF079555 date 1993
AF045212 date 1993-XX-XX
AF045217 date 1994-XX-XX
AF079555 date 1993-XX-XX
AF171232 date 1997-12-01
AF243450 date 1985-04-15
AF280803 date 1994-07-25
AF481485 date 1999-03-22
AJ232203 date 1997
AJ232203 date 1997-XX-XX
AY037020 date 1999-12-13
AY043459 date 1984
AY043459 date 1984-XX-XX
AY184217 date 2002-04-22
AY923185 date 2001-12-17
D01005 date 1974
D01005 date 1974-XX-XX
GU440571 date 2009-11-16
L46750 date 1994
L46753 date 1994
L46758 date 1993
M89921 date 1977
U01974 date 1983
U01976 date 1989
U01977 date 1989
U01987 date 1954
U01994 date 1984
L46750 date 1994-XX-XX
L46753 date 1994-XX-XX
L46758 date 1993-XX-XX
M89921 date 1977-XX-XX
U01974 date 1983-XX-XX
U01976 date 1989-XX-XX
U01977 date 1989-XX-XX
U01987 date 1954-XX-XX
U01994 date 1984-XX-XX
U01998 date 1983-03-21
U64582 date 1988
X84865 date 1994
X84872 date 1990
X84879 date 1971
U64582 date 1988-XX-XX
X84865 date 1994-XX-XX
X84872 date 1990-XX-XX
X84879 date 1971-XX-XX