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Bump wave-utils@0.7.8
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Signed-off-by: Paolo Di Tommaso <paolo.ditommaso@gmail.com>
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pditommaso committed Sep 27, 2023
1 parent 367af52 commit d0c47d4
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Showing 3 changed files with 8 additions and 8 deletions.
2 changes: 1 addition & 1 deletion plugins/nf-wave/build.gradle
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Expand Up @@ -36,7 +36,7 @@ dependencies {
api 'org.apache.commons:commons-lang3:3.12.0'
api 'com.google.code.gson:gson:2.10.1'
api 'org.yaml:snakeyaml:2.0'
api 'io.seqera:wave-utils:0.7.7'
api 'io.seqera:wave-utils:0.7.8'

testImplementation(testFixtures(project(":nextflow")))
testImplementation "org.codehaus.groovy:groovy:3.0.19"
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Expand Up @@ -521,7 +521,7 @@ class WaveClientTest extends Specification {
def assets = client.resolveAssets(task, null, false)
then:
assets.containerFile == '''\
FROM mambaorg/micromamba:1.4.9
FROM mambaorg/micromamba:1.5.1
COPY --chown=$MAMBA_USER:$MAMBA_USER conda.yml /tmp/conda.yml
RUN micromamba install -y -n base -f /tmp/conda.yml \\
&& micromamba install -y -n base conda-forge::procps-ng \\
Expand Down Expand Up @@ -557,7 +557,7 @@ class WaveClientTest extends Specification {
def assets = client.resolveAssets(task, null, false)
then:
assets.containerFile == '''\
FROM mambaorg/micromamba:1.4.9
FROM mambaorg/micromamba:1.5.1
RUN \\
micromamba install -y -n base -c conda-forge -c defaults -f https://host.com/conda-lock.yml \\
&& micromamba install -y -n base conda-forge::procps-ng \\
Expand Down Expand Up @@ -632,7 +632,7 @@ class WaveClientTest extends Specification {
def assets = client.resolveAssets(task, null, false)
then:
assets.containerFile == '''\
FROM mambaorg/micromamba:1.4.9
FROM mambaorg/micromamba:1.5.1
COPY --chown=$MAMBA_USER:$MAMBA_USER conda.yml /tmp/conda.yml
RUN micromamba install -y -n base -f /tmp/conda.yml \\
&& micromamba install -y -n base conda-forge::procps-ng \\
Expand Down Expand Up @@ -712,7 +712,7 @@ class WaveClientTest extends Specification {
then:
assets.containerFile == '''\
BootStrap: docker
From: mambaorg/micromamba:1.4.9
From: mambaorg/micromamba:1.5.1
%files
{{wave_context_dir}}/conda.yml /scratch/conda.yml
%post
Expand Down Expand Up @@ -753,7 +753,7 @@ class WaveClientTest extends Specification {
then:
assets.containerFile == '''\
BootStrap: docker
From: mambaorg/micromamba:1.4.9
From: mambaorg/micromamba:1.5.1
%post
micromamba install -y -n base -c conda-forge -c defaults -f https://host.com/lock-file.yaml
micromamba install -y -n base conda-forge::procps-ng
Expand Down Expand Up @@ -787,7 +787,7 @@ class WaveClientTest extends Specification {
then:
assets.containerFile == '''\
BootStrap: docker
From: mambaorg/micromamba:1.4.9
From: mambaorg/micromamba:1.5.1
%files
{{wave_context_dir}}/conda.yml /scratch/conda.yml
%post
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Expand Up @@ -86,7 +86,7 @@ class WaveConfigTest extends Specification {
when:
def opts = new WaveConfig([:])
then:
opts.condaOpts().mambaImage == 'mambaorg/micromamba:1.4.9'
opts.condaOpts().mambaImage == 'mambaorg/micromamba:1.5.1'
opts.condaOpts().commands == null

when:
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