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[FIX] fixing the asymmetric case in search_information #136

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Mar 5, 2024
Merged

[FIX] fixing the asymmetric case in search_information #136

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3 changes: 2 additions & 1 deletion netneurotools/metrics.py
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Original file line number Diff line number Diff line change
Expand Up @@ -123,7 +123,7 @@ def distance_wei_floyd(D):
netneurotools.metrics.retrieve_shortest_path
"""
spl_mat, p_mat = shortest_path(
D, method="FW", directed=False, return_predecessors=True,
D, method="FW", directed=True, return_predecessors=True,
unweighted=False, overwrite=False
)
return spl_mat, p_mat
Expand Down Expand Up @@ -560,6 +560,7 @@ def search_information(W, D, has_memory=False):
for j in range(N):
if i == j: # skip self connection
continue
path = retrieve_shortest_path(i, j, p_mat)
if path[0] != -1: # no path, depends on retrieve_shortest_path
if has_memory:
pr_step_ff = \
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