python3 version

This is the first python3 only version.

Releasing version 0.7.1, last python2 version

This is the end of development for the python2 version.

blasto & abed

• blasto executable
• abed executable

docs & validation

• docs have been added to agepy.readthedocs.io
• functions have been tested and corrected as docs were created

cytoscape integration

• cytoscape integration
• bug fixes
• aDiff distributed through the bin folder

Split modules

The following modules were generated:

• bed.py
• biom.py
• david.py
• fasta.py
• go.py
• gtf.py
• homology.py
• kegg.py
• meme.py
• plots.py
• rbiom.py
• sam.py

Import can now also be performed as

import AGEpy as age

0.4.0

AGEpy-0.4.0

README.md: pip install

0.3.2

• bug fixes to [bit]

0.3.1

• Additional functions in AGEpy.
• [bit] now does rsync between servers

0.2.3

This release incorporates the first executables:

bit - git based code and data management tool

david - a DAVID querying tool.