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bug: error when call get_ts() function of class HeadUFile #1503

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flydream0428 opened this issue Aug 16, 2022 · 1 comment · Fixed by #1510
Closed

bug: error when call get_ts() function of class HeadUFile #1503

flydream0428 opened this issue Aug 16, 2022 · 1 comment · Fixed by #1510
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bug in progress enhancement in progress

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@flydream0428
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Describe the bug
The get_ts() function does not work as expected. In my case, I have a MF-USG model with a total number of 1379177 nodes.
I get the errors below when I call this function.

image
image
@wpbonelli wpbonelli added the in progress enhancement in progress label Aug 23, 2022
wpbonelli added a commit to wpbonelli/flopy that referenced this issue Aug 23, 2022
@wpbonelli
fix(HeadUFile): repro & fix modflowpy#1503, add tests
6d0018b
@wpbonelli wpbonelli mentioned this issue Aug 23, 2022
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Thanks for the bug report @flydream0428, patch in progress

wpbonelli added a commit to wpbonelli/flopy that referenced this issue Aug 23, 2022
@wpbonelli
fix(HeadUFile): repro & fix modflowpy#1503, add tests
496e7fc
wpbonelli added a commit to wpbonelli/flopy that referenced this issue Aug 24, 2022
@wpbonelli
fix(HeadUFile): repro & fix modflowpy#1503, add tests
5944989
wpbonelli added a commit to wpbonelli/flopy that referenced this issue Aug 25, 2022
@wpbonelli
fix(HeadUFile): fix modflowpy#1503
4ba027e 
* add flopy.utils.grid.py module and get_lni(ncpl, *nodes) function ('layer node index')
* add get_lni(*nodes) method to grids
* use get_lni in HeadUFile.get_ts(idx) (fix modflowpy#1503)
* run linter on examples and tests
wpbonelli added a commit to wpbonelli/flopy that referenced this issue Aug 25, 2022
@wpbonelli
fix(HeadUFile): fix modflowpy#1503
3984e00 
* add flopy.utils.grid.py module and get_lni(ncpl, *nodes) function ('layer node index')
* add get_lni(*nodes) method to grids
* use get_lni in HeadUFile.get_ts(idx) (fix modflowpy#1503)
* run linter on examples and tests
wpbonelli added a commit to wpbonelli/flopy that referenced this issue Aug 25, 2022
@wpbonelli
fix(HeadUFile): fix modflowpy#1503
ff771d2 
* add flopy.utils.grid.py and get_lni(ncpl, *nodes) function ('layer node index')
* add get_lni(*nodes) method to grids
* add tests for new functions & methods
* use get_lni in HeadUFile.get_ts(idx) (fix modflowpy#1503)
* test HeadUFile.get_ts(idx) for every grid node
* run linter on examples and tests
* add addopts = -ra to pytest.ini (show info for skipped/xfailed tests)
* add pytest-cases to setup.cfg test dependencies
* use pytest-cases to define grids & parametrize grid tests
wpbonelli added a commit to wpbonelli/flopy that referenced this issue Aug 25, 2022
@wpbonelli
fix(HeadUFile): fix modflowpy#1503
83fa40e 
* add flopy.utils.grid.py and get_lni(ncpl, *nodes) function ('layer node index')
* add get_lni(*nodes) method to grids
* add tests for new functions & methods
* use get_lni in HeadUFile.get_ts(idx) (fix modflowpy#1503)
* test HeadUFile.get_ts(idx) for every grid node
* run linter on examples and tests
* add addopts = -ra to pytest.ini (show info for skipped/xfailed tests)
* add pytest-cases to setup.cfg and environment.yml test dependencies
* use pytest-cases to define grids & parametrize grid tests
wpbonelli added a commit to wpbonelli/flopy that referenced this issue Aug 25, 2022
@wpbonelli
fix(HeadUFile): fix modflowpy#1503
017f730 
* add flopy.utils.grid.py and get_lni(ncpl, *nodes) function ('layer node index')
* add get_lni(*nodes) method to grids
* add tests for new functions & methods
* use get_lni in HeadUFile.get_ts(idx) (fix modflowpy#1503)
* test HeadUFile.get_ts(idx) for every grid node
* run linter on examples and tests
* add addopts = -ra to pytest.ini (show info for skipped/xfailed tests)
* add pytest-cases to setup.cfg and environment.yml test dependencies
* use pytest-cases to define grids & parametrize grid tests
wpbonelli added a commit to wpbonelli/flopy that referenced this issue Aug 25, 2022
@wpbonelli
fix(HeadUFile): fix modflowpy#1503
db9201c 
* add flopy.utils.grid.py and get_lni(ncpl, *nodes) function ('layer node index')
* add get_lni(*nodes) method to grids
* add tests for new functions & methods
* use get_lni in HeadUFile.get_ts(idx) (fix modflowpy#1503)
* test HeadUFile.get_ts(idx) for every grid node
* run linter on examples and tests
* add addopts = -ra to pytest.ini (show info for skipped/xfailed tests)
* add pytest-cases to setup.cfg and environment.yml test dependencies
* use pytest-cases to define grids & parametrize grid tests
wpbonelli added a commit to wpbonelli/flopy that referenced this issue Aug 25, 2022
@wpbonelli
fix(HeadUFile): fix modflowpy#1503
e23302f 
* add flopy.utils.grid.py and get_lni(ncpl, *nodes) function ('layer node index')
* add get_lni(*nodes) method to grids
* add tests for new functions & methods
* use get_lni in HeadUFile.get_ts(idx) (fix modflowpy#1503)
* test HeadUFile.get_ts(idx) for every grid node
* run linter on examples and tests
* add addopts = -ra to pytest.ini (show info for skipped/xfailed tests)
* add pytest-cases to setup.cfg and environment.yml test dependencies
* use pytest-cases to define grids & parametrize grid tests
wpbonelli added a commit to wpbonelli/flopy that referenced this issue Aug 25, 2022
@wpbonelli
fix(HeadUFile): fix modflowpy#1503
c4cb4e4 
* add flopy.utils.grid.py and get_lni(ncpl, *nodes) function ('layer node index')
* add get_lni(*nodes) method to grids
* add tests for new functions & methods
* use get_lni in HeadUFile.get_ts(idx) (fix modflowpy#1503)
* test HeadUFile.get_ts(idx) for every grid node
* run linter on examples and tests
* add addopts = -ra to pytest.ini (show info for skipped/xfailed tests)
* add pytest-cases to setup.cfg and environment.yml test dependencies
* use pytest-cases to define grids & parametrize grid tests
wpbonelli added a commit to wpbonelli/flopy that referenced this issue Aug 25, 2022
@wpbonelli
fix(HeadUFile): fix modflowpy#1503
df84664 
* add flopy.utils.grid.py and get_lni(ncpl, *nodes) function ('layer node index')
* add get_lni(*nodes) method to grids
* add tests for new functions & methods
* use get_lni in HeadUFile.get_ts(idx) (fix modflowpy#1503)
* test HeadUFile.get_ts(idx) for every grid node
* run linter on examples and tests
* add addopts = -ra to pytest.ini (show info for skipped/xfailed tests)
* add pytest-cases to setup.cfg and environment.yml test dependencies
* use pytest-cases to define grids & parametrize grid tests
wpbonelli added a commit to wpbonelli/flopy that referenced this issue Aug 25, 2022
@wpbonelli
fix(HeadUFile): fix modflowpy#1503
ff87d59 
* add flopy.utils.grid.py and get_lni(ncpl, *nodes) function ('layer node index')
* add get_lni(*nodes) method to grids
* add tests for new functions & methods
* use get_lni in HeadUFile.get_ts(idx) (fix modflowpy#1503)
* test HeadUFile.get_ts(idx) for every grid node
* run linter on examples and tests
* add addopts = -ra to pytest.ini (show info for skipped/xfailed tests)
* add pytest-cases to setup.cfg and environment.yml test dependencies
* use pytest-cases to define grids & parametrize grid tests
wpbonelli added a commit to wpbonelli/flopy that referenced this issue Aug 25, 2022
@wpbonelli
fix(HeadUFile): fix modflowpy#1503
12e9909 
* add flopy.utils.grid.py and get_lni(ncpl, *nodes) function ('layer node index')
* add get_lni(*nodes) method to grids
* add tests for new functions & methods
* use get_lni in HeadUFile.get_ts(idx) (fix modflowpy#1503)
* test HeadUFile.get_ts(idx) for every grid node
* run linter on examples and tests
* add addopts = -ra to pytest.ini (show info for skipped/xfailed tests)
* add pytest-cases to setup.cfg and environment.yml test dependencies
* use pytest-cases to define grids & parametrize grid tests
wpbonelli added a commit to wpbonelli/flopy that referenced this issue Aug 26, 2022
@wpbonelli
fix(HeadUFile): fix modflowpy#1503
1d890bf 
* add flopy.utils.grid.py and get_lni(ncpl, *nodes) function ('layer node index')
* add get_lni(*nodes) method to grids
* add tests for new functions & methods
* use get_lni in HeadUFile.get_ts(idx) (fix modflowpy#1503)
* test HeadUFile.get_ts(idx) for every grid node
* run linter on examples and tests
* add addopts = -ra to pytest.ini (show info for skipped/xfailed tests)
* add pytest-cases to setup.cfg and environment.yml test dependencies
* use pytest-cases to define grids & parametrize grid tests
* mark EPSG test cases flaky
jdhughes-usgs pushed a commit that referenced this issue Aug 26, 2022
@wpbonelli
fix(HeadUFile): fix #1503 (#1510)
8f13420 
* add flopy.utils.grid.py and get_lni(ncpl, *nodes) function ('layer node index')
* add get_lni(*nodes) method to grids
* add tests for new functions & methods
* use get_lni in HeadUFile.get_ts(idx) (fix #1503)
* test HeadUFile.get_ts(idx) for every grid node
* run linter on examples and tests
* add addopts = -ra to pytest.ini (show info for skipped/xfailed tests)
* add pytest-cases to setup.cfg and environment.yml test dependencies
* use pytest-cases to define grids & parametrize grid tests
* mark EPSG test cases flaky
wpbonelli added a commit to wpbonelli/flopy that referenced this issue Dec 14, 2022
@wpbonelli
fix(HeadUFile): fix modflowpy#1503 (modflowpy#1510)
ca7532f 
* add flopy.utils.grid.py and get_lni(ncpl, *nodes) function ('layer node index')
* add get_lni(*nodes) method to grids
* add tests for new functions & methods
* use get_lni in HeadUFile.get_ts(idx) (fix modflowpy#1503)
* test HeadUFile.get_ts(idx) for every grid node
* run linter on examples and tests
* add addopts = -ra to pytest.ini (show info for skipped/xfailed tests)
* add pytest-cases to setup.cfg and environment.yml test dependencies
* use pytest-cases to define grids & parametrize grid tests
* mark EPSG test cases flaky
wpbonelli added a commit to wpbonelli/flopy that referenced this issue Dec 14, 2022
@wpbonelli
fix(HeadUFile): fix modflowpy#1503 (modflowpy#1510)
4575b5c 
* add flopy.utils.grid.py and get_lni(ncpl, *nodes) function ('layer node index')
* add get_lni(*nodes) method to grids
* add tests for new functions & methods
* use get_lni in HeadUFile.get_ts(idx) (fix modflowpy#1503)
* test HeadUFile.get_ts(idx) for every grid node
* run linter on examples and tests
* add addopts = -ra to pytest.ini (show info for skipped/xfailed tests)
* add pytest-cases to setup.cfg and environment.yml test dependencies
* use pytest-cases to define grids & parametrize grid tests
* mark EPSG test cases flaky
wpbonelli added a commit that referenced this issue Dec 14, 2022
@wpbonelli
fix(HeadUFile): fix #1503 (#1510)
f212707 
* add flopy.utils.grid.py and get_lni(ncpl, *nodes) function ('layer node index')
* add get_lni(*nodes) method to grids
* add tests for new functions & methods
* use get_lni in HeadUFile.get_ts(idx) (fix #1503)
* test HeadUFile.get_ts(idx) for every grid node
* run linter on examples and tests
* add addopts = -ra to pytest.ini (show info for skipped/xfailed tests)
* add pytest-cases to setup.cfg and environment.yml test dependencies
* use pytest-cases to define grids & parametrize grid tests
* mark EPSG test cases flaky
wpbonelli added a commit to wpbonelli/flopy that referenced this issue Dec 14, 2022
@wpbonelli
fix(HeadUFile): fix modflowpy#1503 (modflowpy#1510)
3472e5c 
* add flopy.utils.grid.py and get_lni(ncpl, *nodes) function ('layer node index')
* add get_lni(*nodes) method to grids
* add tests for new functions & methods
* use get_lni in HeadUFile.get_ts(idx) (fix modflowpy#1503)
* test HeadUFile.get_ts(idx) for every grid node
* run linter on examples and tests
* add addopts = -ra to pytest.ini (show info for skipped/xfailed tests)
* add pytest-cases to setup.cfg and environment.yml test dependencies
* use pytest-cases to define grids & parametrize grid tests
* mark EPSG test cases flaky
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fix(HeadUFile): repro & fix #1503, add tests wpbonelli/flopy
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@wpbonelli @flydream0428