Use micromamba v2

.github/dependabot.yml

@@ -0,0 +1,11 @@
+# See https://docs.github.com/en/code-security/supply-chain-security/keeping-your-dependencies-updated-automatically/keeping-your-actions-up-to-date-with-dependabot
+
+version: 2
+updates:
+
+  - package-ecosystem: "github-actions"
+    directory: "/"
+    schedule:
+      interval: "daily"
+    labels:
+      - "Bot"

.github/workflows/cc-plugin-glider-test.yml

@@ -3,40 +3,32 @@ name: Glider Plugin Tests
 on:
   pull_request:
   push:
-    branches: [master]
 
 jobs:
   run:
     runs-on: ubuntu-latest
 
     steps:
-    - uses: actions/checkout@v2
+    - uses: actions/checkout@v3
 
-    - name: Setup Conda
-      uses: s-weigand/setup-conda@v1
+    - name: Setup Micromamba
+      uses: mamba-org/provision-with-micromamba@v14
       with:
-        activate-conda: false
-        conda-channels: conda-forge
+        environment-file: false
 
-    - name: Python ${{ matrix.python-version }}
+    - name: Python
       shell: bash -l {0}
-      run: |
-        conda create --name TEST python=${{ matrix.python-version }} python=3 pip --file requirements.txt --file test_requirements.txt --strict-channel-priority
-        source activate TEST
-        pip install -e . --no-deps --force-reinstall
-
-    - name: Conda Info
-      shell: bash -l {0}
-      run: |
-        source activate TEST
-        conda info --all
-        conda list
+      run: >
+        micromamba create --name TEST python=3 pip --file requirements.txt --file test_requirements.txt --channel conda-forge
+        && micromamba activate TEST
+        && pip install -e . --no-deps --force-reinstall
 
     - name: cc-plugin-glider tests
       shell: bash -l {0}
-      run: |
-        source activate TEST
-        git clone https://github.com/ioos/cc-plugin-glider.git
-        cd cc-plugin-glider
-        conda install --file requirements.txt --file requirements-dev.txt ;
-        pytest -s -rxs -v cc_plugin_glider
+      run: >
+        micromamba activate TEST
+        && git clone https://github.com/ioos/cc-plugin-glider.git
+        && cd cc-plugin-glider
+        && micromamba install --file requirements.txt --file requirements-dev.txt --channel conda-forge
+        && pip install -e . --no-deps --force-reinstall
+        && pytest -s -rxs -v cc_plugin_glider

.github/workflows/cc-plugin-sgrid-test.yml

@@ -3,40 +3,31 @@ name: SGRID Plugin Tests
 on:
   pull_request:
   push:
-    branches: [master]
 
 jobs:
   run:
     runs-on: ubuntu-latest
 
     steps:
-    - uses: actions/checkout@v2
+    - uses: actions/checkout@v3
 
-    - name: Setup Conda
-      uses: s-weigand/setup-conda@v1
+    - name: Setup Micromamba
+      uses: mamba-org/provision-with-micromamba@main
       with:
-        activate-conda: false
-        conda-channels: conda-forge
+        environment-file: false
 
-    - name: Python ${{ matrix.python-version }}
+    - name: Python
       shell: bash -l {0}
-      run: |
-        conda create --name TEST python=${{ matrix.python-version }} python=3 pip --file requirements.txt --file test_requirements.txt --strict-channel-priority
-        source activate TEST
-        pip install -e . --no-deps --force-reinstall
-
-    - name: Conda Info
-      shell: bash -l {0}
-      run: |
-        source activate TEST
-        conda info --all
-        conda list
+      run: >
+        micromamba create --name TEST python=3 pip --file requirements.txt --file test_requirements.txt --channel conda-forge
+        && micromamba activate TEST
+        && pip install -e . --no-deps --force-reinstall
 
     - name: cc-plugin-glider tests
       shell: bash -l {0}
-      run: |
-        source activate TEST
-        git clone https://github.com/ioos/cc-plugin-sgrid.git
-        cd cc-plugin-sgrid
-        conda install --file requirements.txt --file requirements-dev.txt ;
-        pytest -s -rxs -v cc_plugin_sgrid
+      run: >
+        micromamba activate TEST
+        && git clone https://github.com/ioos/cc-plugin-sgrid.git
+        && cd cc-plugin-sgrid
+        && pip install -e . --no-deps --force-reinstall
+        && pytest -s -rxs -v cc_plugin_sgrid

.github/workflows/cc-plugin-ugrid-test.yml

@@ -0,0 +1,34 @@
+name: UGRID Plugin Tests
+
+on:
+  pull_request:
+  push:
+
+jobs:
+  run:
+    runs-on: ubuntu-latest
+
+    steps:
+    - uses: actions/checkout@v3
+
+    - name: Setup Micromamba
+      uses: mamba-org/provision-with-micromamba@v14
+      with:
+        environment-file: false
+
+    - name: Python
+      shell: bash -l {0}
+      run: >
+        micromamba create --name TEST python=3 pip --file requirements.txt --file test_requirements.txt --channel conda-forge
+        && micromamba activate TEST
+        && pip install -e . --no-deps --force-reinstall
+
+    - name: cc-plugin-glider tests
+      shell: bash -l {0}
+      run: >
+        micromamba activate TEST
+        && git clone https://github.com/ioos/cc-checker-ugrid.git
+        && cd cc-checker-ugrid
+        && micromamba install --file requirements.txt --file requirements-dev.txt --channel conda-forge
+        && pip install -e . --no-deps --force-reinstall
+        && pytest -s -rxs -v cc_plugin_ugrid

.github/workflows/codecov.yml

@@ -3,53 +3,37 @@ name: Code coverage report
 on:
   pull_request:
   push:
-    branches:
-    - master
-    - develop
 
 jobs:
   run:
-    runs-on: ${{ matrix.os }}
-    strategy:
-      matrix:
-        python-version: ["3.10"]
-        os: [ubuntu-latest]
-      fail-fast: false
+    runs-on: ubuntu-latest
 
     steps:
-    - uses: actions/checkout@v2
+    - uses: actions/checkout@v3
 
-    - name: Setup Conda
-      uses: s-weigand/setup-conda@v1
+    - name: Setup Micromamba
+      uses: mamba-org/provision-with-micromamba@v14
       with:
-        activate-conda: false
-        conda-channels: conda-forge
+        environment-file: false
 
-    - name: Python ${{ matrix.python-version }}
+    - name: Python
       shell: bash -l {0}
-      run: |
-        conda create --name TEST python=${{ matrix.python-version }} pip --file requirements.txt --file test_requirements.txt --strict-channel-priority
-        source activate TEST
-        pip install -e . --no-deps --force-reinstall
-
-    - name: Conda Info
-      shell: bash -l {0}
-      run: |
-        source activate TEST
-        conda info --all
-        conda list
+      run: >
+        micromamba create --name TEST python=3 pip --file requirements.txt --file test_requirements.txt --channel conda-forge
+        && micromamba activate TEST
+        && pip install -e . --no-deps --force-reinstall
 
     - name: Run tests with coverage
       shell: bash -l {0}
       run: |
-        source activate TEST
+        micromamba activate TEST
         pytest --cov=compliance_checker --cov-report=xml compliance_checker/tests
       # pass this step even if there are individual test failures, we are
       # interested in the overall level of coverage and other checks can
       # report on test failures.
       continue-on-error: true
 
     - name: Upload to codecov
-      uses: codecov/codecov-action@v2
+      uses: codecov/codecov-action@v3
       with:
         files: coverage.xml

.github/workflows/default-tests.yml

@@ -3,42 +3,33 @@ name: Default Tests
 on:
   pull_request:
   push:
-    branches: [master]
 
 jobs:
   run:
     runs-on: ${{ matrix.os }}
     strategy:
       matrix:
-        python-version: ["3.7", "3.8", "3.9", "3.10"]
+        python-version: ["3.7", "3.8", "3.9", "3.10", "3.11"]
         os: [windows-latest, ubuntu-latest, macos-latest]
       fail-fast: false
 
     steps:
-    - uses: actions/checkout@v2
+    - uses: actions/checkout@v3
 
-    - name: Setup Conda
-      uses: s-weigand/setup-conda@v1
+    - name: Setup Micromamba
+      uses: mamba-org/provision-with-micromamba@v14
       with:
-        activate-conda: false
-        conda-channels: conda-forge
+        environment-file: false
 
     - name: Python ${{ matrix.python-version }}
       shell: bash -l {0}
-      run: |
-        conda create --name TEST python=${{ matrix.python-version }} pip --file requirements.txt --file test_requirements.txt --strict-channel-priority
-        source activate TEST
-        pip install -e . --no-deps --force-reinstall
-
-    - name: Conda Info
-      shell: bash -l {0}
-      run: |
-        source activate TEST
-        conda info --all
-        conda list
+      run: >
+        micromamba create --name TEST python=${{ matrix.python-version }} pip --file requirements.txt --file test_requirements.txt --channel conda-forge
+        && micromamba activate TEST
+        && pip install -e . --no-deps --force-reinstall
 
     - name: Default Tests
       shell: bash -l {0}
       run: |
-        source activate TEST
+        micromamba activate TEST
         pytest -s -rxs -v -k "not integration" compliance_checker

.github/workflows/integration-tests.yml

@@ -3,37 +3,28 @@ name: Integration Tests
 on:
   pull_request:
   push:
-    branches: [master]
 
 jobs:
   run:
     runs-on: ubuntu-latest
 
     steps:
-    - uses: actions/checkout@v2
+    - uses: actions/checkout@v3
 
-    - name: Setup Conda
-      uses: s-weigand/setup-conda@v1
+    - name: Setup Micromamba
+      uses: mamba-org/provision-with-micromamba@v14
       with:
-        activate-conda: false
-        conda-channels: conda-forge
+        environment-file: false
 
-    - name: Python ${{ matrix.python-version }}
+    - name: Create Environment
       shell: bash -l {0}
-      run: |
-        conda create --name TEST python=${{ matrix.python-version }} python=3 pip --file requirements.txt --file test_requirements.txt --strict-channel-priority
-        source activate TEST
-        pip install -e . --no-deps --force-reinstall
-
-    - name: Conda Info
-      shell: bash -l {0}
-      run: |
-        source activate TEST
-        conda info --all
-        conda list
+      run: >
+        micromamba create --name TEST python=3 pip --file requirements.txt --file test_requirements.txt --channel conda-forge
+        && micromamba activate TEST
+        && pip install -e . --no-deps --force-reinstall
 
     - name: Integration Tests
       shell: bash -l {0}
       run: |
-        source activate TEST
-        pytest -m "integration" -s -rxs -v compliance_checker
+        micromamba activate TEST
+        pytest -m "integration" -s -rxs -v --vcr-record=none compliance_checker