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Achievement: Pair ExtraordinaireAchievement: Pull SharkAchievement: Arctic Code Vault Contributor

Achievements

Achievement: Pair ExtraordinaireAchievement: Pull SharkAchievement: Arctic Code Vault Contributor

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hlnicholls/README.md

Python R Shell Script Git Jupyter Notebook Visual Studio Code Google Cloud Postgres GitHub GitLab NumPy Pandas scikit-learn Keras

Genomic analysis tools: PLINK, REGENIE, VEP, Hail, bedtools, post-GWAS analysis (SuSiE and CARMA fine-mapping, coloc, hyprcoloc, TwoSampleMR, enrichment analysis, drug-target prioritisation)

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Hannah's github stats

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  1. exploromics exploromics Public

    Exploratory data analysis tool for genetic and multi-omic data

    Python

  2. Event_Code_Search Event_Code_Search Public

    UKBB ICD code and event search tool.

    Python

  3. carmapy carmapy Public

    Python implementation of the CARMA R fine-mapping package (work in progress)

    Jupyter Notebook

  4. PhD-Thesis PhD-Thesis Public

    Machine learning prioritisation of cardiovascular disease genes following genome-wide association study - code organised by thesis chapters

    Jupyter Notebook

  5. BP-GWAS-Predict BP-GWAS-Predict Public

    BP GWAS gene priortiisation method (code for https://doi.org/10.21203/rs.3.rs-2402775/v1)

    Jupyter Notebook

  6. Gene-selection-per-locus Gene-selection-per-locus Public

    Gene selection per locus (for code review)

    R