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Achievement: YOLOAchievement: Pull Sharkx2Achievement: StarstruckAchievement: Arctic Code Vault Contributor

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@ComputationalSystemsBiology

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gjhuizing/README.md

👋 I’m a PhD student at the ENS PSL & Institut Pasteur working under the joint supervision of Gabriel Peyré and Laura Cantini. My work focuses on the application of optimal transport to single-cell multiomics.

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  1. cantinilab/stories cantinilab/stories Public

    Learning cell fate landscapes from spatial transcriptomics using Fused Gromov-Wasserstein

    Python 8

  2. cantinilab/Mowgli cantinilab/Mowgli Public

    Single-cell multi-omics integration using Optimal Transport

    Python 37 2

  3. CSDUlm/wsingular CSDUlm/wsingular Public

    Python package for the ICML 2022 paper "Unsupervised Ground Metric Learning Using Wasserstein Singular Vectors".

    Python 9

  4. cantinilab/OT-scOmics cantinilab/OT-scOmics Public

    This Python package will allow you to replicate the experiments from our research on applying Optimal Transport as a similarity metric in between single-cell omics data.

    Python 37 7