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Merge developer into master #133

Merged
merged 907 commits into from
Aug 24, 2022
Merged

Merge developer into master #133

merged 907 commits into from
Aug 24, 2022

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houjun
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@houjun houjun commented Aug 17, 2022

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bjorn2 and others added 30 commits June 25, 2020 14:27
@bjorn2
Changed curvilinear mr interface to store 3x3 matrix inverse
fd833a6
@bjorn2
Merge branch 'developer' of https://github.com/geodynamics/sw4 into d…
acfc942 
…eveloper
@bjorn2
minor reordering of 3x3 inverse matrix multiply
9ddf832
@houjun
Fix an issue that causes wrong values are being used (when attenuatio…
a8ff1dc 
…n is enabled) to calculate Vp and Vs for sfileoutput
@houjun
remove temp file
c5ea213
@houjun
revert input file change
59816f0
@houjun
Update sfileouput to write sfile after time stepping is done and to o…
6312876 
…verwrite mu and lambda values when needed
@andersp
Merge pull request #71 from geodynamics/tang/imagehdf5
b2ac24a 
Tang/imagehdf5
@houjun
Sfileouput updates, add to sw4mopt and fix an issue on reading
a31bb93
@houjun
Update sfileouput for sw4mopt to use the result value of rho, vp, and…
ee45e9c 
… vs, horizontal and vertical sample factor WIP
@houjun
Fix an issue in sfileoutput with different horizontal and vertical sa…
92b6bed 
…mple factor
@houjun
Fix an issue when a down-sampled sfile causing the some material valu…
63c8e3f 
…es to be invalid
@houjun
Check whether sw4 is compiled with HDF5 library in pytest script
941b4f1
@andersp
Merge pull request #72 from geodynamics/tang/imagehdf5
350ab26 
Tang/imagehdf5
@bjorn2
first implementation of pseudohessian
c20ff48
@bjorn2
fixed bug in pseudohessian interpolation
869cf6b
@bjorn2
Merge branch 'developer' of https://github.com/geodynamics/sw4 into d…
e2c7d59 
…eveloper
@houjun
Add HDF5 tests, now testing rec, rechdf5, essioutput, sfileoutput, an…
8dba29f 
…d sfile read, minor code updates to sync with raja branch
@houjun
Update document about sfileoutput
2ca34c9
@houjun
Fix a bug with array allocation
bd8eea6
@houjun
Remove unnecessary check
a98aa04
@houjun
Correct off_t type fix
8a0a4a7
@houjun
Fix a bug with SAC-HDF5 downsampling and the number of steps is an od…
d943f19 
…d number
@andersp
Merge pull request #76 from geodynamics/tang/imagehdf5
86267f7 
Tang/imagehdf5
@bjorn2
First implementation of source discretization across curvilinear inte…
0963578 
…rfaces. Updated reference solution, after not using ghost points in time step computation, gives larger time step
@bjorn2
Merge branch 'developer' of https://github.com/geodynamics/sw4 into d…
98f5207 
…eveloper
@houjun
Prototype implementation to use ZFP in essioutput
0cae26f
@houjun
Update essiouput with ZFP compression
21fed8c
@houjun
Add data buffer capability to essioutput
4429b63
@houjun
Update essioutput with data buffer
4080efc
Wei Liu and others added 26 commits February 9, 2022 13:49
change maxstep from 0.5 to 10 to improve convergence
633dc6a
remove adj QC
6ef4368
restore pytest/reference/geodynbc/loh1-h100-mr-geodynbc-1/sta01.txt
d3fd7f0
@andersp
Merge pull request #123 from geodynamics/tang/develop
953f1cc 
Add support for SZ compression
@bjorn2
merged pr from wei + updated sw4mopt user's guide
ff441eb
@bjorn2
Merge branch 'developer' of https://github.com/geodynamics/sw4 into d…
2388ff2 
…eveloper
@bjorn2
Merge branch 'wei-merge' into developer
6a76a85
@houjun
Skip time-consuming tests by default
28680bf
save only asymptotic traveltime from solving Eikonal eq to observatio…
980cb4a 
…n hdf5, reuse it for multi-freq inversion. The final time windows used are saved to output hdf5.
close time window QC files per event
fb7912e
@andersp
Merge pull request #127 from geodynamics/tang/develop
9bbd859 
Skip time-consuming tests by default
@bjorn2
Merge branch 'developer' of https://github.com/geodynamics/sw4 into d…
37f54d3 
…eveloper
@bjorn2
Merge pull request #124 from geodynamics/wl/addt0
a50a4c5 
Add source time offset to time windowing and optimize maxstep
@bjorn2
changed m_win_mode default in Mopt
42dd2bd
@bjorn2
commit after merge
7ba69a2
@bjorn2
Fixed typo in materialparcart, fixed bug in moptmain
bd25eb3
@bjorn2
added new class MaterialParCurv implementing a curvilinear material grid
3bc2711
@bjorn2
Fixed parallelization issue in EW::set_to_zero_at_source, extended ma…
458b7e3 
…ximum length of command lines in parsing in Mopt
@bjorn2
fixed stability outside active domain of saved boundary data for back…
06fe0aa 
…ward time stepping
@bjorn2
added curvilinear grid travel time estimation
eed9837
@bjorn2
Fixed two bugs that affected parallel computing of multiple events, f…
a6c6155 
…irst bug in EW::computeDt, second when writing sfile at the end of moptmain.C
@bjorn2
removed forgotten debug printout, increased input file parsing buffer…
a2d5efa 
… length
@houjun
Fix HDF5 write WINDOWS when running in parallel
77c56e7
@andersp
Merge pull request #130 from geodynamics/hdf5fix
e11b9d9 
Fix HDF5 write WINDOWS when running in parallel
@houjun
Fix issue with ssioutput after restart, update pytest cases
1c54627
@andersp
Merge pull request #131 from geodynamics/ssifix
26c69c6 
Fix issue with ssioutput after restart, update pytest cases
@houjun houjun changed the title Developer Merge developer into master Aug 17, 2022
@andersp andersp merged commit 3182f60 into master Aug 24, 2022
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3 participants
@houjun @andersp @bjorn2