Pulling pfey03-patch-33 into develop #72
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| name: obo file reporter | |
| on: | |
| pull_request | |
| jobs: | |
| report: | |
| env: | |
| GITHUB_ACTION_DIR: ${{ github.workspace }}/github-actions/bin | |
| REPORT_DIR: ${{ github.workspace }}/reports | |
| COMMIT_LIST_FILE: ${{ github.workspace }}/committed.txt | |
| runs-on: ubuntu-20.04 | |
| steps: | |
| - name: check out code | |
| uses: actions/checkout@v2 | |
| - name: create necessary dirs | |
| run: | | |
| mkdir -p ${REPORT_DIR} | |
| mkdir -p ${GITHUB_ACTION_DIR} | |
| - name: download and setup path for github action binary | |
| run: | | |
| curl -L -o ${GITHUB_ACTION_DIR}/actions https://github.com/dictybase-docker/github-actions/releases/download/v2.3.0/action_2.3.0_Linux_x86_64 | |
| chmod +x ${GITHUB_ACTION_DIR}/actions | |
| echo "${GITHUB_ACTION_DIR}" >> $GITHUB_PATH | |
| - name: create a list of modified obo files | |
| run: actions --log-level debug -t ${{ secrets.GITHUB_TOKEN }} fc --payload-file ${GITHUB_EVENT_PATH} -o ${COMMIT_LIST_FILE} -e pull-request --ifs obo --sd true | |
| - name: run obo reporter | |
| uses: docker://dictybase/ontobot:1.8.3 | |
| with: | |
| entrypoint: /usr/local/bin/report | |
| - name: output report in pull request comment | |
| if: ${{ always() }} | |
| run: | | |
| if [ -e ${COMMIT_LIST_FILE} ] | |
| then | |
| actions --log-level debug -t ${{ secrets.GITHUB_TOKEN }} --owner ${{ github.repository_owner }} -r ${{ github.event.repository.name }} report-as-comment -c ${COMMIT_LIST_FILE} -d ${REPORT_DIR} --pull-request-id ${{ github.event.number }} --ref ${GITHUB_SHA} | |
| fi |