Spatial Analysis of Tumor Heterogeneity:

About:

Repository Structure:

Accessing Data:

You can access the entirety of the human-reference data (still working on the others) from the following link. The data being used in the analysis can be broken down into a few parts:

1. Gene Expression Data

• The main gene expression data for each sample will be in the form of a .csv
• Naming convention: sampleName_reference_mat.csv
• E.g.: F8_37_human_mat.csv

2. Sample Projection Data
3. Seurat Objects

Using new SpaceRanger Output Data:

An Aside on Normalization: