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Wp inference #118

Merged
merged 11 commits into from
Sep 20, 2021
Merged

Wp inference #118

merged 11 commits into from
Sep 20, 2021

Commits on Jul 25, 2021

  1. Add simulation control keywords rtol atol and hmax to inference and b… 

    …ioscrape deterministic simulation
    William Poole committed Jul 25, 2021
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Commits on Jul 28, 2021

  1. fixed a bug which caused the CSimInterface to not update its parameters

    William Poole committed Jul 28, 2021
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  2. more init_seed options, including guassian and normal priors + checki… 

    …ng for positivity
    William Poole committed Jul 28, 2021
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  3. bug fix (missing self)

    William Poole committed Jul 28, 2021
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Commits on Jul 29, 2021

  1. typo fix

    William Poole committed Jul 29, 2021
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Commits on Jul 30, 2021

  1. filename option in py_inference

    William Poole committed Jul 30, 2021
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Commits on Aug 1, 2021

  1. loguniform prior sampling initializaiton

    William Poole committed Aug 1, 2021
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Commits on Aug 2, 2021

  1. parameters now can vary in log space

    William Poole committed Aug 2, 2021
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Commits on Aug 6, 2021

  1. precision added to sensitivity analyss and Inference objects now save… 

    … a list of params along with costs
    William Poole committed Aug 6, 2021
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Commits on Aug 7, 2021

  1. ability to skip resetting up the cost function + optional file writing.

    William Poole committed Aug 7, 2021
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Commits on Aug 9, 2021

  1. ability to reset PID default parameters programatically

    William Poole committed Aug 9, 2021
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