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@artic-network

ARTICnetwork

This is the ARTICnetwork project, a Wellcome Trust funded project to provide a system for real-time genomic epidemiology of virus outbreaks.

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  1. artic-ncov2019 artic-ncov2019 Public

    ARTIC nanopore protocol for nCoV2019 novel coronavirus

    Python 168 166

  2. fieldbioinformatics fieldbioinformatics Public

    Forked from zibraproject/zika-pipeline

    The ARTIC field bioinformatics pipeline

    Python 111 68

  3. rampart rampart Public

    Read Assignment, Mapping, and Phylogenetic Analysis in Real Time

    JavaScript 79 34

  4. civet civet Public

    Cluster Investigation & Virus Epidemiology Tool

    Python 48 14

  5. primer-schemes primer-schemes Public

    Primer schemes for real-time genome epidemiology

    Python 27 42

  6. readucks readucks Public

    Nanopore read de-multiplexer

    Python 13 3

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