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  1. decontaminer decontaminer Public

    DecontaMiner is a tool designed and developed to investigate the presence of contaminating sequences in unmapped NGS data. It can suggest the presence of contaminating organisms in sequenced sample…

    Perl 9

  2. CGRphylo CGRphylo Public

    CGR package for phylogeny. Pipeline compare multiple whole genome sequences using alignment free approach Chaos Game Representation (CGR). CRG core function creates the frequencies object for each …

    R 1 2

  3. RNA-seq-tutorial-for-gene-differential-expression-analysis RNA-seq-tutorial-for-gene-differential-expression-analysis Public

    This RNAseq data analysis tutorial is created for educational purpose

    R 30 13

  4. EGFR-ap EGFR-ap Public

    EGFR-AP : Epidermal Growth Factor Receptor-Activity Predictor

    Python

  5. RankerGUI RankerGUI Public

    R script used for the preparation of the initial input file, i.e. merging of various studies by logFC (LogFC),

    R

  6. mutation_load_comparison_plot mutation_load_comparison_plot Public

    This plot is useful for the comparison of mutational load across the cancer types, with input data in 2 coulmns i.e cancer types and mutatonal load for each samples in specificed cancer type.

    R