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@YiZhang-lab

YiZhang-lab

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  1. ChIPpipes ChIPpipes Public

    Forked from icebert/ChIPpipes

    Pipelines for ChIP-seq / CUT&RUN / CUT&Tag etc. analysis

    Python 6 3

  2. eccDNA_RCA_nanopore eccDNA_RCA_nanopore Public

    Forked from icebert/eccDNA_RCA_nanopore

    eccDNA identification from nanopore long reads of rolling-circle amplicon

    R 5 2

  3. iSpatial iSpatial Public

    Forked from Czh3/iSpatial

    infer whole genome spatial transcriptome by integrating single cell RNAseq and spatial transcriptome

    R 5 1

  4. LiRibo-seq LiRibo-seq Public

    Python 3 1

  5. H2Aub_H3K27me3_preimplantation_dynamics H2Aub_H3K27me3_preimplantation_dynamics Public

    HMM Domain called and additional code used in the Chen et, Nature Genetics, 2021 paper

    R 2 1

  6. Bhattacherjee_elal_NC_2019_someCode Bhattacherjee_elal_NC_2019_someCode Public

    Some Rmarkdown of the analysis Bhattacherjee et al, 2019. Contains some extra analysis and results not included

    R 2 2

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