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  1. orthogonalize-polygon orthogonalize-polygon Public

    Orthogonalize polygon in python by making all its angles 90 or 180 deg

    Python 25 4

  2. detect-mutations detect-mutations Public

    Python script for detecting mutations in aligned reads (.bam |.sam) e.g. from RNA base conversion techniques such as TimeLapse, SLAM-seq, TUC-seq

    Python 5 3

  3. ZeLonewolf/osm-overpass-scripts ZeLonewolf/osm-overpass-scripts Public

    Shell scripts for manipulating OpenStreetMap overpass queries

    R 10 2

  4. htseq-count-multi htseq-count-multi Public

    htseq-count version that allows multiple countings of the same .sam file in one pass

    Python

  5. SeqTracks-plot-R SeqTracks-plot-R Public

    Functions for creating sequencing data figures in R

    R

  6. thCHART-analyze thCHART-analyze Public

    Simple pipeline for processing of sequencing data from thCHART, ChIP-seq, APEX-ChIP and similar experiments

    Shell