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@CAIsr

Centre for Advanced Imaging

Centre for Advanced Imaging software repository

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  1. uniQC uniQC Public

    Unified NeuroImaging Quality Control (uniQC) toolbox

    MATLAB 12 4

  2. volgenmodel-nipype volgenmodel-nipype Public

    Forked from carlohamalainen/volgenmodel-nipype

    volgenmodel-nipype is the port of volgenmodel to nipype. It creates nonlinear models from a series of input MINC files.

    Python 2 1

  3. dicom2cloud dicom2cloud Public archive

    This repository is for https://www.healthhack.com.au/ 2017

    Python 3

  4. transparent-singularity transparent-singularity Public archive

    Deploying a singularity container so that it behaves like one would have installed software natively

    Shell 4 4

  5. caid caid Public archive

    CAI image processing pipeline containers for docker and singularity

    Shell 1

  6. LASHiS LASHiS Public

    Forked from thomshaw92/LASHiS

    Longitudinal Automatic Segmentation of Hippocampal Subfields (LASHiS) using multi-contrast MRI.

    Shell 2

Repositories

Showing 10 of 20 repositories
  • LASHiS Public Forked from thomshaw92/LASHiS

    Longitudinal Automatic Segmentation of Hippocampal Subfields (LASHiS) using multi-contrast MRI.

    CAIsr/LASHiS’s past year of commit activity
    Shell 2 GPL-2.0 4 0 0 Updated Feb 1, 2023
  • caid Public archive

    CAI image processing pipeline containers for docker and singularity

    CAIsr/caid’s past year of commit activity
    Shell 1 MIT 0 0 0 Updated Jan 6, 2023
  • transparent-singularity Public archive

    Deploying a singularity container so that it behaves like one would have installed software natively

    CAIsr/transparent-singularity’s past year of commit activity
    Shell 4 MIT 4 0 0 Updated Dec 7, 2022
  • CAIsr.github.io Public

    Describing our tools and imaging workflows

    CAIsr/CAIsr.github.io’s past year of commit activity
    CSS 1 4 0 0 Updated Nov 30, 2022
  • qsm Public

    This docker and singularity image bundles the tgv-qsm algorithm with bet2, dcm2niix and provides a complete QSM processing pipeline.

    CAIsr/qsm’s past year of commit activity
    Shell 9 6 0 0 Updated Mar 10, 2022
  • uniQC Public

    Unified NeuroImaging Quality Control (uniQC) toolbox

    CAIsr/uniQC’s past year of commit activity
    MATLAB 12 4 0 0 Updated Jan 10, 2022
  • volgenmodel-nipype Public Forked from carlohamalainen/volgenmodel-nipype

    volgenmodel-nipype is the port of volgenmodel to nipype. It creates nonlinear models from a series of input MINC files.

    CAIsr/volgenmodel-nipype’s past year of commit activity
    Python 2 BSD-3-Clause 4 0 0 Updated Sep 9, 2021
  • dicom2cloud Public archive

    This repository is for https://www.healthhack.com.au/ 2017

    CAIsr/dicom2cloud’s past year of commit activity
    Python 0 BSD-2-Clause 3 4 0 Updated Jun 1, 2021
  • niftyreg Public

    Mirror of https://cmiclab.cs.ucl.ac.uk/mmodat/niftyreg

    CAIsr/niftyreg’s past year of commit activity
    C 0 BSD-3-Clause 0 0 0 Updated Mar 12, 2021
  • coreg_sim Public

    Simulation code to test the impact of data and alogrithms on coregistration accuracy.

    CAIsr/coreg_sim’s past year of commit activity
    Python 0 1 0 0 Updated Dec 11, 2018
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