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pFindStudio

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  1. pDeep pDeep Public

    pDeep: Predicting MS/MS Spectra of Peptides with Deep Learning

    Python 38 26

  2. pFind3 pFind3 Public

    27 7

  3. pLink2 pLink2 Public

    pLink is a software dedicated for the analysis of chemically cross-linked proteins or protein complexes using mass spectrometry.

    C++ 24 1

  4. pDeep3 pDeep3 Public

    MS/MS prediction for peptides

    Python 23 5

  5. pGlyco3 pGlyco3 Public

    GDB 20 5

  6. pDeepXL pDeepXL Public

    pDeepXL: MS/MS spectrum prediction for cross-linked peptide pairs by deep learning

    Python 11 1

Repositories

Showing 10 of 12 repositories
  • pUniFind Public

    Official repo for pUniFind

    pFindStudio/pUniFind’s past year of commit activity
    Python 8 0 0 0 Updated Jul 8, 2025
  • pLink3 Public

    A search engine for the identification of cross-linked protein complexes or proteomes from mass spectrometry data.

    pFindStudio/pLink3’s past year of commit activity
    7 0 22 0 Updated May 21, 2025
  • pIon Public
    pFindStudio/pIon’s past year of commit activity
    Python 4 GPL-3.0 0 2 0 Updated Mar 14, 2025
  • pGlyco3 Public
    pFindStudio/pGlyco3’s past year of commit activity
    GDB 20 Apache-2.0 5 29 0 Updated Feb 15, 2025
  • pFind3 Public
    pFindStudio/pFind3’s past year of commit activity
    27 7 68 0 Updated Jan 26, 2025
  • pLink2 Public

    pLink is a software dedicated for the analysis of chemically cross-linked proteins or protein complexes using mass spectrometry.

    pFindStudio/pLink2’s past year of commit activity
    C++ 24 1 30 (1 issue needs help) 0 Updated Jan 11, 2025
  • pChem Public

    A modification-centric assessment tool for performance of chemoproteomic probes

    pFindStudio/pChem’s past year of commit activity
    Python 6 Apache-2.0 0 0 0 Updated Jun 5, 2022
  • pDeepXL Public

    pDeepXL: MS/MS spectrum prediction for cross-linked peptide pairs by deep learning

    pFindStudio/pDeepXL’s past year of commit activity
    Python 11 GPL-3.0 1 3 0 Updated Feb 8, 2021
  • pDeep3 Public

    MS/MS prediction for peptides

    pFindStudio/pDeep3’s past year of commit activity
    Python 23 5 1 0 Updated Dec 18, 2020
  • pGlyco2 Public

    pGlyco is a software tool dedicated for the analysis of intact glycopeptides/glycoproteins using mass spectrometry.

    pFindStudio/pGlyco2’s past year of commit activity
    Python 7 3 22 0 Updated Apr 28, 2020
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