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feat: centralize gitlab job definitions more #155

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@wdconinc wdconinc commented Jun 7, 2025

Briefly, what does this PR introduce?

This PR ensures that collect is always run, to make sure snakemake --delete-all-output is run. It centralizes this functionality for inheritance.

What kind of change does this PR introduce?

  • Bug fix (issue #__)
  • New feature (issue #__)
  • Documentation update
  • Other: __

Please check if this PR fulfills the following:

  • Tests for the changes have been added
  • Documentation has been added / updated
  • Changes have been communicated to collaborators

Does this PR introduce breaking changes? What changes might users need to make to their code?

No.

Does this PR change default behavior?

No.

@wdconinc wdconinc changed the title feat: femc collect always feat: centralize gitlab job definitions more Jun 7, 2025
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