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Integrating brainstate, brainevent into brainpy #763

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chaoming0625 and others added 23 commits June 1, 2025 21:26
…nclude brainstate, brainunit, and brainevent
This commit introduces a `pyproject.toml` file to enable seamless installation using UV, the modern Python package installer.
All calls to bm.clear_buffer_memory() in test_aligns.py have been commented out, likely to prevent buffer clearing during test execution or debugging. Additionally, the unused reduce_axes argument and its documentation were removed from grad() in autograd.py for code simplification.
Renamed the Base class in ndarray.py to BaseArray and updated all references in related modules, including Array and Variable. Also fixed the while_loop wrapper in controls.py to correctly unpack operands for the body and condition functions. Uncommented bm.clear_buffer_memory() calls in test_aligns.py to ensure buffer memory is cleared after tests.
Introduced a private method to ensure the random state value exists and is valid. If the value is deleted, it is regenerated before being accessed.
Replaces all references to 'Array' with 'BaseArray' in type checks and imports to align with updated class naming. This improves consistency and clarity in the codebase.
Updated the _ensure_value_exists method to properly check the type of self._value and only regenerate the random state if it is not a numpy array, not a JAX Tracer, and has been deleted. This prevents unnecessary regeneration and ensures correct handling of different value types.
Updated the scan function to use correct argument names ('f' and 'pbar') for brainstate.transform.scan. Fixed while_loop to properly wrap cond_fun in a lambda, matching the expected signature.
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