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tRFtarget-pipeline
tRFtarget-pipeline PublictRFtarget-pipeline is designed to find RNA-RNA interaction sites between transfer RNA-derived fragments (tRFs) and target RNAs, and is used in tRFtarget database (http://trftarget.net/).
Python 2
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- tRFtarget-pipeline Public
tRFtarget-pipeline is designed to find RNA-RNA interaction sites between transfer RNA-derived fragments (tRFs) and target RNAs, and is used in tRFtarget database (http://trftarget.net/).
ZWang-Lab/tRFtarget-pipeline’s past year of commit activity - tRFtarget Public
tRFtarget (http://trftarget.net/) is a comprehensive platform consolidating both computationally predicted and experimentally validated binding interactions between transfer RNA-derived fragments (tRFs) and target transcripts across multiple organisms.
ZWang-Lab/tRFtarget’s past year of commit activity - RVMMAT Public
R package that performs retrospective varying coefficients mixed model association test for longitudinal binary traits in population samples.
ZWang-Lab/RVMMAT’s past year of commit activity - DML-RC Public
DML-RC is a double/debiased machine learning approach with regression calibration to correct for bias due to measurement error. This approach is designed for evaluating the causal effects of correlated multi-pollutant PM2.5 constituents measured with correlated error.
ZWang-Lab/DML-RC’s past year of commit activity - DML-RC_simulations Public
DML-RC_simulations contains all files to replicate the simulation study in the DML-RC paper.
ZWang-Lab/DML-RC_simulations’s past year of commit activity - SDePER_Analysis Public Forked from az7jh2/SDePER_Analysis
This Github repository holds Notebooks and results of running SDePER on both Simulated and Real datasets, and Notebooks for Figure Panels in manuscript.
ZWang-Lab/SDePER_Analysis’s past year of commit activity - SDePER Public Forked from az7jh2/SDePER
SDePER is a two-step hybrid machine learning and regression method considering platform effect, spatial information and sparsity in deconvolution of spatial transcriptomic data using reference single-cell RNA sequencing data. It's also able to impute cell type compositions and gene expression at enhanced resolution.
ZWang-Lab/SDePER’s past year of commit activity - RSIT Public
R package that performs retrospective set-based gene-environment interaction tests for binary traits.
ZWang-Lab/RSIT’s past year of commit activity
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