somatic
Here are 13 public repositories matching this topic...
Assortment of VCF processing scripts
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Apr 23, 2024 - Python
Empirical Bayes somatic variant calling
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Oct 25, 2019 - Python
PhylogicNDT dockcer for clonal evolution analysis
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Oct 27, 2022 - Shell
Nextflow bioinformatics pipeline for large-scale analysis of Multiple Myeloma genomes
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Sep 26, 2024 - Nextflow
Generate duplex/single consensus reads to reduce sequencing noises and remove duplications
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Oct 27, 2023 - C++
Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing
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Jan 27, 2020 - Nextflow
Detect and visualize target mutations by scanning FastQ files directly
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Feb 10, 2022 - C
Personal Cancer Genome Reporter (PCGR)
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Aug 5, 2024 - R
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
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Sep 24, 2024 - Nextflow
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