Beginig of the expansion of DBGWAS to a metagenomic scale.
-
Updated
Jun 21, 2023 - JavaScript
Beginig of the expansion of DBGWAS to a metagenomic scale.
Benchmarks and evaluation scripts for the Fulgor index.
Probabilistic genome assembler based on de Bruijn Graph and profile HMM
Data Analysis for Genomics, Euler Path for Genome Assembly.
Data Analysis for Genomics, De Bruijn Graph Chain Merging Compacting.
Souce code for my MSc Thesis in Computer Science “Nested Marvellous Sequences”
What I learned from Data Structures and Algorithms Specialization on Coursera.
Enumerates Conway's Game of Life's "still lifes" (fixed points) via De Bruijn diagrams. Caml light implementation (boo !)
Data Analysis for Genomics, De Bruijn Graph for Genome Assembly.
Genome assembler de novo that uses De Bruijn graph.
A program which can assembing .fasta file generated by Next Generation Sequencing(NGS) de novo using De Bruijn Graph Algorithm, and can also choose to map(BLAST) the contigs to a reference sequence
Computational Biology Assignments
Computational programs and algorithms used to convert information from biochemical experiments (DNA/RNA/Protein/DNA chip/NGS) into useful information and data.
Sparse Binary Relation Representations for Genome Graph Annotation
Streaming de Bruijn and Compact de Bruijn Graph Algorithms
Germline DNM caller based on LdBG assembly of pathogens
Add a description, image, and links to the de-bruijn-graphs topic page so that developers can more easily learn about it.
To associate your repository with the de-bruijn-graphs topic, visit your repo's landing page and select "manage topics."