research: compatibility with citus

[VoVAllen]

Research if we could support citus

[gaocegege]

cc @cho-thinkfree-com

[shetao2015]

+1

[cutecutecat]

Stream/Physical replication

Current situation

The main problem is at building the index, when index log is replayed inside PG of standby instance:

postgres=# select * from pg_indexes where tablename = 't';
 schemaname | tablename | indexname | tablespace |                                               indexdef                                                
------------+-----------+-----------+------------+-------------------------------------------------------------------------------------------------------
 public     | t         | t_val_idx |            | CREATE INDEX t_val_idx ON public.t USING vectors (val vector_l2_ops) WITH (options='[indexing.hnsw]')
(1 row)

but the backend hook ambuild is not triggered at WAL replay of standby instance. So they are no longer in sync, which lead to this error at any vector query:

postgres=# SELECT idx_status, idx_indexing FROM pg_vector_index_stat;
ERROR:  pgvecto.rs: The index is not existing in the background worker.
ADVICE: Drop or rebuild the index.

Implement

We need to write a custom WAL manager like this PR.

These operations should be logged:

• Index create
• Index edit
• Index drop

graph LR
A[ambuild<br>main] --> B[XLogBeginInsert<br>main]
B[XLogBeginInsert<br>main] -->|auto| C[Write custom WAL<br>main]
C[Write custom WAL<br>main] -->|publish| D[standby]
E[standby] -->|hook| F[decode & replay<br>standby]
F[decode & replay<br>standby] --> G[rpc.create<br>standby]

Loading

ref:

• https://www.postgresql.org/docs/current/custom-rmgr.html
• https://github.com/postgres/postgres/blob/c3333dbc0c0f53452abfccf6c2dd5a86728a19dc/src/include/access/xlog_internal.h#L349
• https://github.com/postgres/postgres/blob/c3333dbc0c0f53452abfccf6c2dd5a86728a19dc/src/backend/access/transam/rmgr.c#L57
• https://wiki.postgresql.org/wiki/CustomWALResourceManagers

Limitation

• Write-ahead log (WAL) is supported only on Postgres 15+ due to the fact that custom WAL managers were introduced in Postgres 15

[cutecutecat]

Citus

🎉Citus is basically compatible with PGVecto.rs at the verification.

graph LR
1[items] --> 2[items_102016]
1[items] --> 3[items_102017]
1[items] --> 4[items_102018]
1[items] --> 5[items_102019]
2[items_102016] --> 6[items_embedding_idx_102016]
3[items_102017] --> 7[items_embedding_idx_102017]
4[items_102018] --> 8[items_embedding_idx_102018]
5[items_102019] --> 9[items_embedding_idx_102019]
6[items_embedding_idx_102016] --> 10[items_embedding_idx]
7[items_embedding_idx_102017] --> 10[items_embedding_idx]
8[items_embedding_idx_102018] --> 10[items_embedding_idx]
9[items_embedding_idx_102019] --> 10[items_embedding_idx]

Loading

Checklist

• Index create and query of vector are succeeded
• Indexes are distributed to all subtables(EXPLAIN query plan)

postgres=# EXPLAIN SELECT id FROM items ORDER BY embedding <-> '[1,2,3]' LIMIT 1;
                                                                QUERY PLAN                                                                
------------------------------------------------------------------------------------------------------------------------------------------
 Limit  (cost=500.00..500.00 rows=1 width=12)
   ->  Sort  (cost=500.00..750.00 rows=100000 width=12)
         Sort Key: remote_scan.worker_column_2
         ->  Custom Scan (Citus Adaptive)  (cost=0.00..0.00 rows=100000 width=12)
               Task Count: 4
               Tasks Shown: All
               ->  Task
                     Node: host=localhost port=5432 dbname=postgres
                     ->  Limit  (cost=0.00..0.02 rows=1 width=12)
                           ->  Index Scan using items_embedding_idx_102016 on items_102016 items  (cost=0.00..502.74 rows=23979 width=12)
                                 Order By: (embedding <-> '[1, 2, 3]'::vector)
               ->  Task
                     Node: host=localhost port=5432 dbname=postgres
                     ->  Limit  (cost=0.00..0.02 rows=1 width=12)
                           ->  Index Scan using items_embedding_idx_102017 on items_102017 items  (cost=0.00..546.92 rows=26074 width=12)
                                 Order By: (embedding <-> '[1, 2, 3]'::vector)
               ->  Task
                     Node: host=localhost port=5432 dbname=postgres
                     ->  Limit  (cost=0.00..0.02 rows=1 width=12)
                           ->  Index Scan using items_embedding_idx_102018 on items_102018 items  (cost=0.00..462.53 rows=22042 width=12)
                                 Order By: (embedding <-> '[1, 2, 3]'::vector)
               ->  Task
                     Node: host=localhost port=5432 dbname=postgres
                     ->  Limit  (cost=0.00..0.02 rows=1 width=12)
                           ->  Index Scan using items_embedding_idx_102019 on items_102019 items  (cost=0.00..584.81 rows=27905 width=12)
                                 Order By: (embedding <-> '[1, 2, 3]'::vector)
(26 rows)

• Indexes correspond with vectors of each subtable

root@7b2d6e048a03:/# cat /var/lib/postgresql/data/pg_vectors/startup/0 ; echo
{"indexes":[{"tenant_id":0,"cluster_id":7410314701760323622,"database_id":5,"index_id":17744},{"tenant_id":0,"cluster_id":7410314701760323622,"database_id":5,"index_id":17746},{"tenant_id":0,"cluster_id":7410314701760323622,"database_id":5,"index_id":17745},{"tenant_id":0,"cluster_id":7410314701760323622,"database_id":5,"index_id":17742},{"tenant_id":0,"cluster_id":7410314701760323622,"database_id":5,"index_id":17743}]}

root@7b2d6e048a03:/# cat /var/lib/postgresql/data/pg_vectors/indexes/0000000000000000000000000000000066d6b9f5b04760260000000500004552/sealed_segments/1/storage/len ; echo
27899

root@7b2d6e048a03:/# cat /var/lib/postgresql/data/pg_vectors/indexes/0000000000000000000000000000000066d6b9f5b04760260000000500004551/sealed_segments/1/storage/len ; echo
22061

• No loss in vector query accuracy
  recall = 0.8504 at glove+cos+hnsw regardless of citus on/off

• Citus feature: single node

• Citus feature: multi node

postgres=# EXPLAIN SELECT id FROM items ORDER BY embedding <=> '[1,1,1]' LIMIT 100;
                                                                QUERY PLAN                                                                
------------------------------------------------------------------------------------------------------------------------------------------
 Limit  (cost=3821.93..3822.18 rows=100 width=12)
   ->  Sort  (cost=3821.93..4071.93 rows=100000 width=12)
         Sort Key: remote_scan.worker_column_2
         ->  Custom Scan (Citus Adaptive)  (cost=0.00..0.00 rows=100000 width=12)
               Task Count: 4
               Tasks Shown: All
               ->  Task
                     Node: host=172.18.0.1 port=5430 dbname=postgres
                     ->  Limit  (cost=0.00..2.10 rows=100 width=12)
                           ->  Index Scan using items_embedding_idx_102028 on items_102028 items  (cost=0.00..501.98 rows=23918 width=12)
                                 Order By: (embedding <=> '[1, 1, 1]'::vector)
               ->  Task
                     Node: host=172.18.0.1 port=5431 dbname=postgres
                     ->  Limit  (cost=0.00..2.10 rows=100 width=12)
                           ->  Index Scan using items_embedding_idx_102029 on items_102029 items  (cost=0.00..545.11 rows=26009 width=12)
                                 Order By: (embedding <=> '[1, 1, 1]'::vector)
               ->  Task
                     Node: host=172.18.0.1 port=5430 dbname=postgres
                     ->  Limit  (cost=0.00..2.10 rows=100 width=12)
                           ->  Index Scan using items_embedding_idx_102030 on items_102030 items  (cost=0.00..464.84 rows=22147 width=12)
                                 Order By: (embedding <=> '[1, 1, 1]'::vector)
               ->  Task
                     Node: host=172.18.0.1 port=5431 dbname=postgres
                     ->  Limit  (cost=0.00..2.10 rows=100 width=12)
                           ->  Index Scan using items_embedding_idx_102031 on items_102031 items  (cost=0.00..585.08 rows=27926 width=12)
                                 Order By: (embedding <=> '[1, 1, 1]'::vector)
(26 rows)

• Citus feature: Schema-based sharding
• Citus feature: Row-based sharding

Limitation

• The result of SELECT * FROM pg_vector_index_stat; is not correct

 tablerelid | indexrelid | tablename |      indexname      | idx_status | idx_indexing | idx_tuples | idx_sealed | idx_growing | idx_write | idx_size |                                                                  idx_options                                                                   
------------+------------+-----------+---------------------+------------+--------------+------------+------------+-------------+-----------+----------+------------------------------------------------------------------------------------------------------------------------------------------------
      17652 |      17689 | items     | items_embedding_idx | NORMAL     | f            |          0 | {}         | {}          |         0 |        0 | {"vector":{"dimensions":3,"vector":"Vecf32","distance":"L2"},"indexing":{"hnsw":{"m":12,"ef_construction":300,"quantization":{"trivial":{}}}}}
(1 row)

Without citus, it shoule be:

 tablerelid | indexrelid | tablename |      indexname      | idx_status | idx_indexing | idx_tuples | idx_sealed | idx_growing | idx_write | idx_size |                                                                  idx_options                                                                   
------------+------------+-----------+---------------------+------------+--------------+------------+------------+-------------+-----------+----------+------------------------------------------------------------------------------------------------------------------------------------------------
      17695 |      17703 | items     | items_embedding_idx | NORMAL     | f            |     100000 | {100000}   | {}          |         0 | 22909429 | {"vector":{"dimensions":3,"vector":"Vecf32","distance":"L2"},"indexing":{"hnsw":{"m":12,"ef_construction":300,"quantization":{"trivial":{}}}}}
(1 row)

[gaocegege]

Thanks for your research!