value boxes and re-engineering

sigven · Mar 7, 2024 · 0005c54 · 0005c54
1 parent dd3ae44
commit 0005c54
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Showing 33 changed files with 1,425 additions and 1,020 deletions.
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -2,7 +2,7 @@ Package: cpsr
 Type: Package
 Title: Cancer Predisposition Sequencing Reporter (CPSR)
 Version: 1.0.1.9003
-Date: 2024-02-04
+Date: 2024-03-07
 Authors@R:
     c(person(given = "Sigve",
              family = "Nakken",

diff --git a/NAMESPACE b/NAMESPACE
@@ -3,8 +3,11 @@
 export(append_cpg_properties)
 export(assign_classification)
 export(assign_pathogenicity_evidence)
-export(assign_variant_tiers)
 export(check_variant2cancer_phenotype)
+export(combine_novel_and_preclassified)
+export(exclude_vars_by_maf)
+export(exclude_vars_non_cancer)
+export(exclude_vars_noncoding)
 export(generate_cpsr_report)
 export(get_insilico_prediction_statistics)
 export(get_max_rows_pr_datatable)